Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
TPM1P09493 AL035423.1-201ENST00000420331 213 ntBASIC3.65□□□□□ -1.83
TPM1P09493 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.65□□□□□ -1.83
TPM1P09493 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.65□□□□□ -1.83
TPM1P09493 ETF1P3-201ENST00000430422 1160 ntBASIC3.65□□□□□ -1.83
TPM1P09493 AC115115.1-201ENST00000449927 248 ntBASIC3.65□□□□□ -1.83
TPM1P09493 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.65□□□□□ -1.83
TPM1P09493 AC089999.1-201ENST00000460336 374 ntBASIC3.65□□□□□ -1.83
TPM1P09493 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.65□□□□□ -1.83
TPM1P09493 FCF1P8-201ENST00000510322 597 ntBASIC3.65□□□□□ -1.83
TPM1P09493 SNORA70.17-201ENST00000516449 133 ntBASIC3.65□□□□□ -1.83
TPM1P09493 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.65□□□□□ -1.83
TPM1P09493 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TPM1P09493 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.65□□□□□ -1.83
TPM1P09493 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.65□□□□□ -1.83
TPM1P09493 AC009268.1-201ENST00000561352 1203 ntBASIC3.65□□□□□ -1.83
TPM1P09493 AC055876.1-202ENST00000567053 138 ntBASIC3.65□□□□□ -1.83
TPM1P09493 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.65□□□□□ -1.83
TPM1P09493 AC067852.3-201ENST00000589177 561 ntBASIC3.65□□□□□ -1.83
TPM1P09493 YWHAQP7-201ENST00000603536 658 ntBASIC3.65□□□□□ -1.83
TPM1P09493 AL591516.1-201ENST00000611326 274 ntBASIC3.65□□□□□ -1.83
TPM1P09493 uc_338.1-201ENST00000612113 180 ntBASIC3.65□□□□□ -1.83
TPM1P09493 AC024023.1-201ENST00000624530 922 ntBASIC3.65□□□□□ -1.83
TPM1P09493 AC016717.3-201ENST00000624730 554 ntBASIC3.65□□□□□ -1.83
TPM1P09493 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
TPM1P09493 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TPM1P09493 CR383658.2-201ENST00000547576 1525 ntBASIC3.65□□□□□ -1.83
TPM1P09493 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
TPM1P09493 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TPM1P09493 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.64□□□□□ -1.83
TPM1P09493 MTND5P7-201ENST00000413558 1798 ntBASIC3.64□□□□□ -1.83
TPM1P09493 AC093010.3-201ENST00000570269 15214 ntBASIC3.64□□□□□ -1.83
TPM1P09493 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TPM1P09493 RNU6-152P-201ENST00000384037 107 ntBASIC3.64□□□□□ -1.83
TPM1P09493 SNORD3H-201ENST00000384486 214 ntBASIC3.64□□□□□ -1.83
TPM1P09493 RN7SKP111-201ENST00000410349 271 ntBASIC3.64□□□□□ -1.83
TPM1P09493 BMS1P22-201ENST00000414726 313 ntBASIC3.64□□□□□ -1.83
TPM1P09493 TOMM22P1-201ENST00000418578 312 ntBASIC3.64□□□□□ -1.83
TPM1P09493 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TPM1P09493 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.64□□□□□ -1.83
TPM1P09493 AL353705.1-201ENST00000433468 480 ntBASIC3.64□□□□□ -1.83
TPM1P09493 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.64□□□□□ -1.83
TPM1P09493 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.64□□□□□ -1.83
TPM1P09493 AC126121.1-201ENST00000482313 553 ntBASIC3.64□□□□□ -1.83
TPM1P09493 AC104115.2-201ENST00000523026 687 ntBASIC3.64□□□□□ -1.83
TPM1P09493 MTCO1P49-201ENST00000523429 802 ntBASIC3.64□□□□□ -1.83
TPM1P09493 PARP1P2-201ENST00000556806 195 ntBASIC3.64□□□□□ -1.83
TPM1P09493 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.64□□□□□ -1.83
TPM1P09493 MAGOH2P-202ENST00000584384 429 ntBASIC3.64□□□□□ -1.83
TPM1P09493 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.64□□□□□ -1.83
TPM1P09493 AC099676.1-201ENST00000608886 657 ntBASIC3.64□□□□□ -1.83
TPM1P09493 AC019176.2-201ENST00000611579 315 ntBASIC3.64□□□□□ -1.83
TPM1P09493 AL136164.4-201ENST00000625013 2135 ntBASIC3.64□□□□□ -1.83
TPM1P09493 MTND5P19-201ENST00000424872 1794 ntBASIC3.63□□□□□ -1.83
TPM1P09493 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TPM1P09493 NSRP1P1-201ENST00000444067 1693 ntBASIC3.63□□□□□ -1.83
TPM1P09493 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TPM1P09493 RNA5SP197-201ENST00000363357 119 ntBASIC3.63□□□□□ -1.83
TPM1P09493 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TPM1P09493 MIR937-201ENST00000401271 86 ntBASIC3.63□□□□□ -1.83
TPM1P09493 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.63□□□□□ -1.83
TPM1P09493 RN7SKP123-201ENST00000410732 291 ntBASIC3.63□□□□□ -1.83
TPM1P09493 MTCYBP24-201ENST00000420387 1106 ntBASIC3.63□□□□□ -1.83
TPM1P09493 DPPA2P1-201ENST00000428060 556 ntBASIC3.63□□□□□ -1.83
TPM1P09493 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.63□□□□□ -1.83
TPM1P09493 RPL7P29-201ENST00000437151 728 ntBASIC3.63□□□□□ -1.83
TPM1P09493 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.63□□□□□ -1.83
TPM1P09493 AL606490.8-201ENST00000441624 319 ntBASIC3.63□□□□□ -1.83
TPM1P09493 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.63□□□□□ -1.83
TPM1P09493 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TPM1P09493 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.63□□□□□ -1.83
TPM1P09493 SBDSP1-204ENST00000453858 737 ntBASIC3.63□□□□□ -1.83
TPM1P09493 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.63□□□□□ -1.83
TPM1P09493 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.63□□□□□ -1.83
TPM1P09493 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.63□□□□□ -1.83
TPM1P09493 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.63□□□□□ -1.83
TPM1P09493 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TPM1P09493 AC016065.2-201ENST00000514530 444 ntBASIC3.63□□□□□ -1.83
TPM1P09493 RNU1-143P-201ENST00000516296 146 ntBASIC3.63□□□□□ -1.83
TPM1P09493 RN7SKP21-201ENST00000516503 220 ntBASIC3.63□□□□□ -1.83
TPM1P09493 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.63□□□□□ -1.83
TPM1P09493 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.63□□□□□ -1.83
TPM1P09493 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.63□□□□□ -1.83
TPM1P09493 AP000619.3-201ENST00000535634 1127 ntBASIC3.63□□□□□ -1.83
TPM1P09493 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.63□□□□□ -1.83
TPM1P09493 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.63□□□□□ -1.83
TPM1P09493 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.63□□□□□ -1.83
TPM1P09493 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.63□□□□□ -1.83
TPM1P09493 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.63□□□□□ -1.83
TPM1P09493 MIR4474-201ENST00000579189 78 ntBASIC3.63□□□□□ -1.83
TPM1P09493 AF230666.2-201ENST00000602328 725 ntBASIC3.63□□□□□ -1.83
TPM1P09493 U1.23-201ENST00000610293 146 ntBASIC3.63□□□□□ -1.83
TPM1P09493 RNU1-68P-201ENST00000615382 146 ntBASIC3.63□□□□□ -1.83
TPM1P09493 U1.39-201ENST00000621562 146 ntBASIC3.63□□□□□ -1.83
TPM1P09493 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.63□□□□□ -1.83
TPM1P09493 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.63□□□□□ -1.83
TPM1P09493 AC119674.1-220ENST00000641502 1048 ntBASIC3.63□□□□□ -1.83
TPM1P09493 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TPM1P09493 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TPM1P09493 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms