Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DOAP06340 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DOAP06340 RPL21P110-201ENST00000433345 446 ntBASIC5.07□□□□□ -1.6
HLA-DOAP06340 AL596276.1-201ENST00000434465 418 ntBASIC5.07□□□□□ -1.6
HLA-DOAP06340 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DOAP06340 RBMX2P4-201ENST00000441256 376 ntBASIC5.07□□□□□ -1.6
HLA-DOAP06340 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DOAP06340 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DOAP06340 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DOAP06340 AL591473.1-201ENST00000464297 313 ntBASIC5.07□□□□□ -1.6
HLA-DOAP06340 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DOAP06340 AC116337.2-201ENST00000477662 156 ntBASIC5.07□□□□□ -1.6
HLA-DOAP06340 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.07□□□□□ -1.6
HLA-DOAP06340 AC011352.3-201ENST00000505162 593 ntBASIC5.07□□□□□ -1.6
HLA-DOAP06340 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DOAP06340 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DOAP06340 PGBD4P4-201ENST00000509673 613 ntBASIC5.07□□□□□ -1.6
HLA-DOAP06340 AC093281.2-201ENST00000510153 597 ntBASIC5.07□□□□□ -1.6
HLA-DOAP06340 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DOAP06340 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DOAP06340 AP001207.1-201ENST00000524051 481 ntBASIC5.07□□□□□ -1.6
HLA-DOAP06340 AP003392.2-201ENST00000527269 208 ntBASIC5.07□□□□□ -1.6
HLA-DOAP06340 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
HLA-DOAP06340 BPTFP1-201ENST00000579209 492 ntBASIC5.07□□□□□ -1.6
HLA-DOAP06340 AC091805.2-201ENST00000603848 235 ntBASIC5.07□□□□□ -1.6
HLA-DOAP06340 AL357078.3-201ENST00000607528 618 ntBASIC5.07□□□□□ -1.6
HLA-DOAP06340 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DOAP06340 AL357080.1-201ENST00000617394 239 ntBASIC5.07□□□□□ -1.6
HLA-DOAP06340 uc_338.9-201ENST00000617424 182 ntBASIC5.07□□□□□ -1.6
HLA-DOAP06340 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DOAP06340 AC112484.5-201ENST00000624189 228 ntBASIC5.07□□□□□ -1.6
HLA-DOAP06340 RNA5SP196-201ENST00000625967 102 ntBASIC5.07□□□□□ -1.6
HLA-DOAP06340 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DOAP06340 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DOAP06340 AC092447.7-201ENST00000422212 1621 ntBASIC5.07□□□□□ -1.6
HLA-DOAP06340 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
HLA-DOAP06340 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DOAP06340 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DOAP06340 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DOAP06340 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
HLA-DOAP06340 AC097461.1-201ENST00000568928 2821 ntBASIC5.06□□□□□ -1.6
HLA-DOAP06340 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DOAP06340 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DOAP06340 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DOAP06340 HMGB1P5-201ENST00000255320 642 ntBASIC5.06□□□□□ -1.6
HLA-DOAP06340 RNU5D-1-201ENST00000363299 116 ntBASIC5.06□□□□□ -1.6
HLA-DOAP06340 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DOAP06340 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DOAP06340 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DOAP06340 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.06□□□□□ -1.6
HLA-DOAP06340 AC108032.1-201ENST00000416706 207 ntBASIC5.06□□□□□ -1.6
HLA-DOAP06340 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DOAP06340 FNDC3CP-201ENST00000420795 1155 ntBASIC5.06□□□□□ -1.6
HLA-DOAP06340 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-DOAP06340 AC010975.2-201ENST00000427781 588 ntBASIC5.06□□□□□ -1.6
HLA-DOAP06340 RPEP2-201ENST00000432149 701 ntBASIC5.06□□□□□ -1.6
HLA-DOAP06340 AL050321.1-201ENST00000432363 400 ntBASIC5.06□□□□□ -1.6
HLA-DOAP06340 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-DOAP06340 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-DOAP06340 RPS7P5-201ENST00000441482 581 ntBASIC5.06□□□□□ -1.6
HLA-DOAP06340 COX6CP12-201ENST00000446748 202 ntBASIC5.06□□□□□ -1.6
HLA-DOAP06340 RPL30P9-201ENST00000465586 330 ntBASIC5.06□□□□□ -1.6
HLA-DOAP06340 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DOAP06340 AC091544.1-201ENST00000484702 348 ntBASIC5.06□□□□□ -1.6
HLA-DOAP06340 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DOAP06340 ACTG1P13-201ENST00000486987 1043 ntBASIC5.06□□□□□ -1.6
HLA-DOAP06340 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DOAP06340 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DOAP06340 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DOAP06340 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DOAP06340 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DOAP06340 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DOAP06340 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.06□□□□□ -1.6
HLA-DOAP06340 CYCSP28-201ENST00000534284 321 ntBASIC5.06□□□□□ -1.6
HLA-DOAP06340 OR8R1P-201ENST00000543943 764 ntBASIC5.06□□□□□ -1.6
HLA-DOAP06340 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-DOAP06340 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DOAP06340 GTF2IP8-201ENST00000560687 584 ntBASIC5.06□□□□□ -1.6
HLA-DOAP06340 AC087481.2-201ENST00000565492 330 ntBASIC5.06□□□□□ -1.6
HLA-DOAP06340 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.06□□□□□ -1.6
HLA-DOAP06340 MIR548AB-201ENST00000584917 84 ntBASIC5.06□□□□□ -1.6
HLA-DOAP06340 AP003973.1-201ENST00000604639 691 ntBASIC5.06□□□□□ -1.6
HLA-DOAP06340 AC112220.3-201ENST00000605502 502 ntBASIC5.06□□□□□ -1.6
HLA-DOAP06340 AC073348.1-201ENST00000623002 331 ntBASIC5.06□□□□□ -1.6
HLA-DOAP06340 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DOAP06340 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DOAP06340 AL672167.1-203ENST00000641299 2975 ntBASIC5.06□□□□□ -1.6
HLA-DOAP06340 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DOAP06340 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DOAP06340 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DOAP06340 PABPC1P9-201ENST00000426076 1612 ntBASIC5.05□□□□□ -1.6
HLA-DOAP06340 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DOAP06340 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DOAP06340 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DOAP06340 CASC19-204ENST00000641001 2055 ntBASIC5.05□□□□□ -1.6
HLA-DOAP06340 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DOAP06340 RNU6-621P-201ENST00000364752 109 ntBASIC5.05□□□□□ -1.6
HLA-DOAP06340 RNU6-317P-201ENST00000384031 107 ntBASIC5.05□□□□□ -1.6
HLA-DOAP06340 MIR217-201ENST00000384817 110 ntBASIC5.05□□□□□ -1.6
HLA-DOAP06340 CYCSP45-201ENST00000402289 315 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms