Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PDGFAP04085 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PDGFAP04085 RNU6-1287P-201ENST00000362914 107 ntBASIC5.74□□□□□ -1.49
PDGFAP04085 RNU6-432P-201ENST00000384196 109 ntBASIC5.74□□□□□ -1.49
PDGFAP04085 RNU6-1060P-201ENST00000384664 107 ntBASIC5.74□□□□□ -1.49
PDGFAP04085 U3.25-201ENST00000391209 220 ntBASIC5.74□□□□□ -1.49
PDGFAP04085 RNA5SP107-201ENST00000411358 122 ntBASIC5.74□□□□□ -1.49
PDGFAP04085 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.74□□□□□ -1.49
PDGFAP04085 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.74□□□□□ -1.49
PDGFAP04085 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.74□□□□□ -1.49
PDGFAP04085 GAPDHP48-201ENST00000436626 961 ntBASIC5.74□□□□□ -1.49
PDGFAP04085 AL022237.1-201ENST00000446663 358 ntBASIC5.74□□□□□ -1.49
PDGFAP04085 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.74□□□□□ -1.49
PDGFAP04085 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.74□□□□□ -1.49
PDGFAP04085 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.74□□□□□ -1.49
PDGFAP04085 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.74□□□□□ -1.49
PDGFAP04085 AC011225.1-201ENST00000457751 369 ntBASIC5.74□□□□□ -1.49
PDGFAP04085 AC090602.1-201ENST00000469695 252 ntBASIC5.74□□□□□ -1.49
PDGFAP04085 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.74□□□□□ -1.49
PDGFAP04085 AC093303.1-201ENST00000514549 295 ntBASIC5.74□□□□□ -1.49
PDGFAP04085 RNU6-566P-201ENST00000516790 107 ntBASIC5.74□□□□□ -1.49
PDGFAP04085 RNU6-1088P-201ENST00000516850 104 ntBASIC5.74□□□□□ -1.49
PDGFAP04085 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.74□□□□□ -1.49
PDGFAP04085 IGHV3-57-201ENST00000520143 280 ntBASIC5.74□□□□□ -1.49
PDGFAP04085 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.74□□□□□ -1.49
PDGFAP04085 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC5.74□□□□□ -1.49
PDGFAP04085 APOOP3-201ENST00000536787 586 ntBASIC5.74□□□□□ -1.49
PDGFAP04085 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.74□□□□□ -1.49
PDGFAP04085 AL355836.1-201ENST00000555951 870 ntBASIC5.74□□□□□ -1.49
PDGFAP04085 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.74□□□□□ -1.49
PDGFAP04085 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.74□□□□□ -1.49
PDGFAP04085 AC019322.1-201ENST00000571869 389 ntBASIC5.74□□□□□ -1.49
PDGFAP04085 MIR4790-201ENST00000577799 79 ntBASIC5.74□□□□□ -1.49
PDGFAP04085 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.74□□□□□ -1.49
PDGFAP04085 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.74□□□□□ -1.49
PDGFAP04085 AC019193.3-201ENST00000609144 554 ntBASIC5.74□□□□□ -1.49
PDGFAP04085 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
PDGFAP04085 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFAP04085 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFAP04085 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFAP04085 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
PDGFAP04085 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
PDGFAP04085 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
PDGFAP04085 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFAP04085 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.74□□□□□ -1.49
PDGFAP04085 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
PDGFAP04085 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.74□□□□□ -1.49
PDGFAP04085 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.74□□□□□ -1.49
PDGFAP04085 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.74□□□□□ -1.49
PDGFAP04085 AC125336.1-201ENST00000508893 2827 ntBASIC5.74□□□□□ -1.49
PDGFAP04085 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFAP04085 IQCB2P-201ENST00000401788 1633 ntBASIC5.74□□□□□ -1.49
PDGFAP04085 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
PDGFAP04085 ZNF734P-201ENST00000419494 1534 ntBASIC5.74□□□□□ -1.49
PDGFAP04085 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.73□□□□□ -1.49
PDGFAP04085 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFAP04085 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFAP04085 AC010329.1-201ENST00000593903 8328 ntBASIC5.73□□□□□ -1.49
PDGFAP04085 AC133552.1-201ENST00000569988 4007 ntBASIC5.73□□□□□ -1.49
PDGFAP04085 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
PDGFAP04085 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PDGFAP04085 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
PDGFAP04085 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFAP04085 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFAP04085 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFAP04085 AC009951.1-201ENST00000623674 2614 ntBASIC5.73□□□□□ -1.49
PDGFAP04085 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PDGFAP04085 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFAP04085 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFAP04085 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PDGFAP04085 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFAP04085 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFAP04085 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFAP04085 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFAP04085 SNORD8-201ENST00000363915 110 ntBASIC5.73□□□□□ -1.49
PDGFAP04085 SNORD115-7-201ENST00000365306 82 ntBASIC5.73□□□□□ -1.49
PDGFAP04085 SNORA22B-201ENST00000383876 138 ntBASIC5.73□□□□□ -1.49
PDGFAP04085 RNU4-46P-201ENST00000410818 138 ntBASIC5.73□□□□□ -1.49
PDGFAP04085 BX323014.1-201ENST00000412876 237 ntBASIC5.73□□□□□ -1.49
PDGFAP04085 AL354890.1-201ENST00000413730 346 ntBASIC5.73□□□□□ -1.49
PDGFAP04085 AC005517.2-201ENST00000424673 553 ntBASIC5.73□□□□□ -1.49
PDGFAP04085 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.73□□□□□ -1.49
PDGFAP04085 BX323845.3-201ENST00000428215 527 ntBASIC5.73□□□□□ -1.49
PDGFAP04085 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.73□□□□□ -1.49
PDGFAP04085 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.73□□□□□ -1.49
PDGFAP04085 ST13P14-201ENST00000474095 734 ntBASIC5.73□□□□□ -1.49
PDGFAP04085 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.73□□□□□ -1.49
PDGFAP04085 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.73□□□□□ -1.49
PDGFAP04085 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.73□□□□□ -1.49
PDGFAP04085 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.73□□□□□ -1.49
PDGFAP04085 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.73□□□□□ -1.49
PDGFAP04085 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.73□□□□□ -1.49
PDGFAP04085 HMGN1P28-201ENST00000521340 364 ntBASIC5.73□□□□□ -1.49
PDGFAP04085 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.73□□□□□ -1.49
PDGFAP04085 PCNAP4-201ENST00000532690 730 ntBASIC5.73□□□□□ -1.49
PDGFAP04085 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.73□□□□□ -1.49
PDGFAP04085 SNRPGP18-201ENST00000553000 214 ntBASIC5.73□□□□□ -1.49
PDGFAP04085 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.73□□□□□ -1.49
PDGFAP04085 AC007494.1-201ENST00000562293 760 ntBASIC5.73□□□□□ -1.49
PDGFAP04085 MIR4489-201ENST00000578869 62 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms