Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 CIR1P1-201ENST00000524055 1133 ntBASIC3.12□□□□□ -1.91
APOA1P02647 AC022690.1-201ENST00000526681 550 ntBASIC3.12□□□□□ -1.91
APOA1P02647 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.12□□□□□ -1.91
APOA1P02647 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.12□□□□□ -1.91
APOA1P02647 AC026333.2-201ENST00000542164 106 ntBASIC3.12□□□□□ -1.91
APOA1P02647 AC023161.2-201ENST00000551218 780 ntBASIC3.12□□□□□ -1.91
APOA1P02647 AC005412.1-201ENST00000580812 1049 ntBASIC3.12□□□□□ -1.91
APOA1P02647 COX6CP3-201ENST00000580869 223 ntBASIC3.12□□□□□ -1.91
APOA1P02647 IPO5P1-202ENST00000600039 287 ntBASIC3.12□□□□□ -1.91
APOA1P02647 XIAPP1-201ENST00000603162 600 ntBASIC3.12□□□□□ -1.91
APOA1P02647 AC073387.2-201ENST00000604797 784 ntBASIC3.12□□□□□ -1.91
APOA1P02647 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.12□□□□□ -1.91
APOA1P02647 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
APOA1P02647 AC024595.1-201ENST00000623088 387 ntBASIC3.12□□□□□ -1.91
APOA1P02647 AC073476.4-201ENST00000628409 72 ntBASIC3.12□□□□□ -1.91
APOA1P02647 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.12□□□□□ -1.91
APOA1P02647 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.12□□□□□ -1.91
APOA1P02647 CIR1P2-201ENST00000514821 1342 ntBASIC3.12□□□□□ -1.91
APOA1P02647 AL355578.1-201ENST00000607405 1328 ntBASIC3.12□□□□□ -1.91
APOA1P02647 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
APOA1P02647 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.12□□□□□ -1.91
APOA1P02647 AC005261.4-201ENST00000600047 1385 ntBASIC3.12□□□□□ -1.91
APOA1P02647 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
APOA1P02647 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.12□□□□□ -1.91
APOA1P02647 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.11□□□□□ -1.91
APOA1P02647 AC103988.1-201ENST00000566382 2177 ntBASIC3.11□□□□□ -1.91
APOA1P02647 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
APOA1P02647 ZNF807-201ENST00000328088 1707 ntBASIC3.11□□□□□ -1.91
APOA1P02647 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOA1P02647 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.11□□□□□ -1.91
APOA1P02647 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
APOA1P02647 RNU4-39P-201ENST00000362455 127 ntBASIC3.11□□□□□ -1.91
APOA1P02647 RNA5SP258-201ENST00000362750 119 ntBASIC3.11□□□□□ -1.91
APOA1P02647 SNORA51.1-201ENST00000363243 140 ntBASIC3.11□□□□□ -1.91
APOA1P02647 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOA1P02647 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOA1P02647 RNU6-339P-201ENST00000384310 107 ntBASIC3.11□□□□□ -1.91
APOA1P02647 RPS3AP26-201ENST00000398259 784 ntBASIC3.11□□□□□ -1.91
APOA1P02647 RNU4-6P-201ENST00000410804 122 ntBASIC3.11□□□□□ -1.91
APOA1P02647 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.11□□□□□ -1.91
APOA1P02647 RPS3AP9-201ENST00000417027 792 ntBASIC3.11□□□□□ -1.91
APOA1P02647 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.11□□□□□ -1.91
APOA1P02647 AC006960.1-201ENST00000419980 153 ntBASIC3.11□□□□□ -1.91
APOA1P02647 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.11□□□□□ -1.91
APOA1P02647 RPS27AP7-201ENST00000422792 455 ntBASIC3.11□□□□□ -1.91
APOA1P02647 SDCBPP2-201ENST00000424643 885 ntBASIC3.11□□□□□ -1.91
APOA1P02647 OR8F1P-201ENST00000425243 930 ntBASIC3.11□□□□□ -1.91
APOA1P02647 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.11□□□□□ -1.91
APOA1P02647 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.11□□□□□ -1.91
APOA1P02647 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.11□□□□□ -1.91
APOA1P02647 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.11□□□□□ -1.91
APOA1P02647 AC006326.1-201ENST00000445465 787 ntBASIC3.11□□□□□ -1.91
APOA1P02647 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.11□□□□□ -1.91
APOA1P02647 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.11□□□□□ -1.91
APOA1P02647 CYCSP53-201ENST00000455540 265 ntBASIC3.11□□□□□ -1.91
APOA1P02647 AC015724.1-201ENST00000478577 156 ntBASIC3.11□□□□□ -1.91
APOA1P02647 AC013356.1-201ENST00000489027 564 ntBASIC3.11□□□□□ -1.91
APOA1P02647 AC005726.1-201ENST00000494679 427 ntBASIC3.11□□□□□ -1.91
APOA1P02647 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.11□□□□□ -1.91
APOA1P02647 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.11□□□□□ -1.91
APOA1P02647 MTCO3P44-201ENST00000510977 541 ntBASIC3.11□□□□□ -1.91
APOA1P02647 AC105914.1-201ENST00000511798 226 ntBASIC3.11□□□□□ -1.91
APOA1P02647 AC104057.1-201ENST00000515547 497 ntBASIC3.11□□□□□ -1.91
APOA1P02647 RNU6-488P-201ENST00000515918 99 ntBASIC3.11□□□□□ -1.91
APOA1P02647 RN7SKP282-201ENST00000516824 299 ntBASIC3.11□□□□□ -1.91
APOA1P02647 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.11□□□□□ -1.91
APOA1P02647 AC083923.1-201ENST00000523708 376 ntBASIC3.11□□□□□ -1.91
APOA1P02647 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.11□□□□□ -1.91
APOA1P02647 AC087481.2-201ENST00000565492 330 ntBASIC3.11□□□□□ -1.91
APOA1P02647 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.11□□□□□ -1.91
APOA1P02647 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.11□□□□□ -1.91
APOA1P02647 AC092474.3-201ENST00000603022 568 ntBASIC3.11□□□□□ -1.91
APOA1P02647 AC006077.1-201ENST00000604746 343 ntBASIC3.11□□□□□ -1.91
APOA1P02647 AC013468.1-201ENST00000608680 598 ntBASIC3.11□□□□□ -1.91
APOA1P02647 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.11□□□□□ -1.91
APOA1P02647 AL354976.1-201ENST00000613843 387 ntBASIC3.11□□□□□ -1.91
APOA1P02647 AC114781.5-201ENST00000615297 108 ntBASIC3.11□□□□□ -1.91
APOA1P02647 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOA1P02647 AL121890.3-201ENST00000618494 516 ntBASIC3.11□□□□□ -1.91
APOA1P02647 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOA1P02647 AC006111.3-201ENST00000622137 383 ntBASIC3.11□□□□□ -1.91
APOA1P02647 AC095031.1-201ENST00000623685 672 ntBASIC3.11□□□□□ -1.91
APOA1P02647 AL136520.1-201ENST00000600311 1322 ntBASIC3.11□□□□□ -1.91
APOA1P02647 AC007656.2-201ENST00000624902 4547 ntBASIC3.11□□□□□ -1.91
APOA1P02647 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.11□□□□□ -1.91
APOA1P02647 ZNF90P1-201ENST00000480493 1951 ntBASIC3.11□□□□□ -1.91
APOA1P02647 API5P2-201ENST00000397055 1498 ntBASIC3.1□□□□□ -1.91
APOA1P02647 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.1□□□□□ -1.91
APOA1P02647 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
APOA1P02647 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
APOA1P02647 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.1□□□□□ -1.91
APOA1P02647 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC3.1□□□□□ -1.91
APOA1P02647 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
APOA1P02647 RPL21P3-201ENST00000395517 478 ntBASIC3.1□□□□□ -1.91
APOA1P02647 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.1□□□□□ -1.91
APOA1P02647 RN7SKP53-201ENST00000411337 315 ntBASIC3.1□□□□□ -1.91
APOA1P02647 RPL32P35-201ENST00000415214 394 ntBASIC3.1□□□□□ -1.91
APOA1P02647 UBE2D3P2-201ENST00000424409 445 ntBASIC3.1□□□□□ -1.91
APOA1P02647 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.1□□□□□ -1.91
APOA1P02647 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms