Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 MTCO3P35-201ENST00000485582 781 ntBASIC4.02□□□□□ -1.77
COL2A1P02458 AC004057.1-201ENST00000485827 348 ntBASIC4.02□□□□□ -1.77
COL2A1P02458 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.02□□□□□ -1.77
COL2A1P02458 HMGB1P21-201ENST00000502313 581 ntBASIC4.02□□□□□ -1.77
COL2A1P02458 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.02□□□□□ -1.77
COL2A1P02458 Y_RNA.688-201ENST00000516565 95 ntBASIC4.02□□□□□ -1.77
COL2A1P02458 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.02□□□□□ -1.77
COL2A1P02458 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.02□□□□□ -1.77
COL2A1P02458 AC087894.1-201ENST00000538359 518 ntBASIC4.02□□□□□ -1.77
COL2A1P02458 AL442163.2-201ENST00000553912 710 ntBASIC4.02□□□□□ -1.77
COL2A1P02458 OR4U1P-201ENST00000554958 912 ntBASIC4.02□□□□□ -1.77
COL2A1P02458 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.02□□□□□ -1.77
COL2A1P02458 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.02□□□□□ -1.77
COL2A1P02458 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.02□□□□□ -1.77
COL2A1P02458 AC006023.1-201ENST00000603944 259 ntBASIC4.02□□□□□ -1.77
COL2A1P02458 AC087752.4-201ENST00000605911 462 ntBASIC4.02□□□□□ -1.77
COL2A1P02458 AC021851.1-201ENST00000608537 1082 ntBASIC4.02□□□□□ -1.77
COL2A1P02458 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.02□□□□□ -1.77
COL2A1P02458 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.02□□□□□ -1.77
COL2A1P02458 AL359757.2-201ENST00000624309 274 ntBASIC4.02□□□□□ -1.77
COL2A1P02458 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL2A1P02458 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.02□□□□□ -1.77
COL2A1P02458 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL2A1P02458 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.02□□□□□ -1.77
COL2A1P02458 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.02□□□□□ -1.77
COL2A1P02458 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
COL2A1P02458 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.01□□□□□ -1.77
COL2A1P02458 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
COL2A1P02458 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL2A1P02458 MIR7-1-201ENST00000384871 110 ntBASIC4.01□□□□□ -1.77
COL2A1P02458 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.01□□□□□ -1.77
COL2A1P02458 AL024507.1-201ENST00000412741 274 ntBASIC4.01□□□□□ -1.77
COL2A1P02458 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.01□□□□□ -1.77
COL2A1P02458 AC013262.1-201ENST00000426710 252 ntBASIC4.01□□□□□ -1.77
COL2A1P02458 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.01□□□□□ -1.77
COL2A1P02458 KATNBL1P3-201ENST00000443475 909 ntBASIC4.01□□□□□ -1.77
COL2A1P02458 CCRL1P1-201ENST00000449542 1053 ntBASIC4.01□□□□□ -1.77
COL2A1P02458 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.01□□□□□ -1.77
COL2A1P02458 AC109925.1-201ENST00000478069 331 ntBASIC4.01□□□□□ -1.77
COL2A1P02458 AC011825.1-201ENST00000484967 388 ntBASIC4.01□□□□□ -1.77
COL2A1P02458 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.01□□□□□ -1.77
COL2A1P02458 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.01□□□□□ -1.77
COL2A1P02458 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL2A1P02458 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.01□□□□□ -1.77
COL2A1P02458 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.01□□□□□ -1.77
COL2A1P02458 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.01□□□□□ -1.77
COL2A1P02458 AL132857.1-201ENST00000555180 708 ntBASIC4.01□□□□□ -1.77
COL2A1P02458 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL2A1P02458 AC124312.4-201ENST00000605533 310 ntBASIC4.01□□□□□ -1.77
COL2A1P02458 AC090425.2-201ENST00000608818 501 ntBASIC4.01□□□□□ -1.77
COL2A1P02458 AC013412.1-201ENST00000610687 192 ntBASIC4.01□□□□□ -1.77
COL2A1P02458 AC231759.1-201ENST00000616455 597 ntBASIC4.01□□□□□ -1.77
COL2A1P02458 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.01□□□□□ -1.77
COL2A1P02458 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
COL2A1P02458 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL2A1P02458 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL2A1P02458 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
COL2A1P02458 AC009501.3-201ENST00000605001 1352 ntBASIC4.01□□□□□ -1.77
COL2A1P02458 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL2A1P02458 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL2A1P02458 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4□□□□□ -1.77
COL2A1P02458 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
COL2A1P02458 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4□□□□□ -1.77
COL2A1P02458 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4□□□□□ -1.77
COL2A1P02458 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL2A1P02458 OTUD4P1-201ENST00000237841 3067 ntBASIC4□□□□□ -1.77
COL2A1P02458 MTCO1P24-201ENST00000515438 1558 ntBASIC4□□□□□ -1.77
COL2A1P02458 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4□□□□□ -1.77
COL2A1P02458 AL031779.1-201ENST00000415663 330 ntBASIC4□□□□□ -1.77
COL2A1P02458 MORF4L1P6-201ENST00000418771 268 ntBASIC4□□□□□ -1.77
COL2A1P02458 MTCO3P4-201ENST00000419236 787 ntBASIC4□□□□□ -1.77
COL2A1P02458 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4□□□□□ -1.77
COL2A1P02458 AC010099.3-201ENST00000423896 409 ntBASIC4□□□□□ -1.77
COL2A1P02458 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4□□□□□ -1.77
COL2A1P02458 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COL2A1P02458 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4□□□□□ -1.77
COL2A1P02458 MTND4P6-201ENST00000438297 472 ntBASIC4□□□□□ -1.77
COL2A1P02458 ATP5C1P1-201ENST00000441945 895 ntBASIC4□□□□□ -1.77
COL2A1P02458 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4□□□□□ -1.77
COL2A1P02458 BET1P1-201ENST00000482276 359 ntBASIC4□□□□□ -1.77
COL2A1P02458 AC080014.1-201ENST00000496877 1201 ntBASIC4□□□□□ -1.77
COL2A1P02458 AC010486.2-201ENST00000505572 483 ntBASIC4□□□□□ -1.77
COL2A1P02458 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4□□□□□ -1.77
COL2A1P02458 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL2A1P02458 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4□□□□□ -1.77
COL2A1P02458 RPL7L1P13-201ENST00000511702 739 ntBASIC4□□□□□ -1.77
COL2A1P02458 AC010486.1-201ENST00000511793 424 ntBASIC4□□□□□ -1.77
COL2A1P02458 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4□□□□□ -1.77
COL2A1P02458 OR4R3P-201ENST00000525084 838 ntBASIC4□□□□□ -1.77
COL2A1P02458 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4□□□□□ -1.77
COL2A1P02458 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4□□□□□ -1.77
COL2A1P02458 AC092868.3-201ENST00000560515 784 ntBASIC4□□□□□ -1.77
COL2A1P02458 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4□□□□□ -1.77
COL2A1P02458 MTCYBP33-201ENST00000575007 1130 ntBASIC4□□□□□ -1.77
COL2A1P02458 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4□□□□□ -1.77
COL2A1P02458 AL450472.3-201ENST00000615578 367 ntBASIC4□□□□□ -1.77
COL2A1P02458 AL512506.2-201ENST00000624472 458 ntBASIC4□□□□□ -1.77
COL2A1P02458 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4□□□□□ -1.77
COL2A1P02458 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL2A1P02458 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms