Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SEMA3DO95025 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.3□□□□□ -1.88
SEMA3DO95025 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.3□□□□□ -1.88
SEMA3DO95025 RPS27AP1-201ENST00000475545 471 ntBASIC3.3□□□□□ -1.88
SEMA3DO95025 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.3□□□□□ -1.88
SEMA3DO95025 AC106707.2-201ENST00000484182 374 ntBASIC3.3□□□□□ -1.88
SEMA3DO95025 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SEMA3DO95025 AC092185.1-201ENST00000491371 97 ntBASIC3.3□□□□□ -1.88
SEMA3DO95025 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.3□□□□□ -1.88
SEMA3DO95025 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.3□□□□□ -1.88
SEMA3DO95025 AC110792.2-201ENST00000510278 224 ntBASIC3.3□□□□□ -1.88
SEMA3DO95025 AC104619.4-201ENST00000510773 249 ntBASIC3.3□□□□□ -1.88
SEMA3DO95025 SNORA31.13-201ENST00000516624 135 ntBASIC3.3□□□□□ -1.88
SEMA3DO95025 RN7SKP289-201ENST00000517244 295 ntBASIC3.3□□□□□ -1.88
SEMA3DO95025 IGKV2-36-201ENST00000519999 223 ntBASIC3.3□□□□□ -1.88
SEMA3DO95025 MTCO1P49-201ENST00000523429 802 ntBASIC3.3□□□□□ -1.88
SEMA3DO95025 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.3□□□□□ -1.88
SEMA3DO95025 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.3□□□□□ -1.88
SEMA3DO95025 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.3□□□□□ -1.88
SEMA3DO95025 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.3□□□□□ -1.88
SEMA3DO95025 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.3□□□□□ -1.88
SEMA3DO95025 AC069304.3-201ENST00000603938 1084 ntBASIC3.3□□□□□ -1.88
SEMA3DO95025 AC100814.1-201ENST00000606963 623 ntBASIC3.3□□□□□ -1.88
SEMA3DO95025 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SEMA3DO95025 AC025016.1-201ENST00000616746 682 ntBASIC3.3□□□□□ -1.88
SEMA3DO95025 AL357559.1-201ENST00000622228 274 ntBASIC3.3□□□□□ -1.88
SEMA3DO95025 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.3□□□□□ -1.88
SEMA3DO95025 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.3□□□□□ -1.88
SEMA3DO95025 AC009093.8-201ENST00000641769 292 ntBASIC3.3□□□□□ -1.88
SEMA3DO95025 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SEMA3DO95025 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SEMA3DO95025 MTND5P27-201ENST00000428871 1720 ntBASIC3.3□□□□□ -1.88
SEMA3DO95025 AC017071.1-201ENST00000564407 2204 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SEMA3DO95025 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.29□□□□□ -1.88
SEMA3DO95025 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SEMA3DO95025 SNORD115-48-201ENST00000364764 76 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SEMA3DO95025 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.29□□□□□ -1.88
SEMA3DO95025 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SEMA3DO95025 MIR554-201ENST00000384874 96 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 AL356967.1-201ENST00000406305 431 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 AL353692.2-201ENST00000407054 335 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 MTND3P20-201ENST00000407663 186 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 RAB9AP3-201ENST00000412737 573 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.29□□□□□ -1.88
SEMA3DO95025 RPL17P36-201ENST00000420302 549 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 AL513174.1-201ENST00000423182 629 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.29□□□□□ -1.88
SEMA3DO95025 RPL23AP82-202ENST00000427528 469 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 DPPA2P1-201ENST00000428060 556 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 ZNF965P-201ENST00000432501 817 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 ELOCP3-201ENST00000439303 348 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.29□□□□□ -1.88
SEMA3DO95025 RAB9AP1-201ENST00000449393 573 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 MTND2P3-201ENST00000452458 470 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SEMA3DO95025 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.29□□□□□ -1.88
SEMA3DO95025 ARPC3P2-201ENST00000457786 533 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.29□□□□□ -1.88
SEMA3DO95025 RPS27P29-201ENST00000463110 252 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 CENPBD1P1-201ENST00000464061 469 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 RPL37P6-202ENST00000464216 403 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 VN1R17P-201ENST00000472048 1090 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.29□□□□□ -1.88
SEMA3DO95025 AC010285.3-201ENST00000511668 676 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 AC093755.1-201ENST00000512950 1023 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 RN7SKP13-201ENST00000515933 244 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.29□□□□□ -1.88
SEMA3DO95025 AC107934.2-201ENST00000518653 310 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.29□□□□□ -1.88
SEMA3DO95025 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.29□□□□□ -1.88
SEMA3DO95025 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SEMA3DO95025 CKS1BP1-201ENST00000555221 240 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 OR4H12P-201ENST00000556269 907 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 MIR3690-201ENST00000580266 75 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 AC104307.1-201ENST00000616142 196 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 U6.48-201ENST00000618523 106 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.29□□□□□ -1.88
SEMA3DO95025 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.29□□□□□ -1.88
SEMA3DO95025 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.29□□□□□ -1.88
SEMA3DO95025 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SEMA3DO95025 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.29□□□□□ -1.88
SEMA3DO95025 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.28□□□□□ -1.88
SEMA3DO95025 AC093908.1-201ENST00000623125 8092 ntBASIC3.28□□□□□ -1.88
SEMA3DO95025 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SEMA3DO95025 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.28□□□□□ -1.88
SEMA3DO95025 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.28□□□□□ -1.88
SEMA3DO95025 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SEMA3DO95025 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SEMA3DO95025 RNU6-805P-201ENST00000365643 106 ntBASIC3.28□□□□□ -1.88
SEMA3DO95025 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SEMA3DO95025 RNU6-98P-201ENST00000384173 107 ntBASIC3.28□□□□□ -1.88
SEMA3DO95025 RPL36AP36-201ENST00000418616 301 ntBASIC3.28□□□□□ -1.88
SEMA3DO95025 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.28□□□□□ -1.88
SEMA3DO95025 ATP5JP1-201ENST00000431631 322 ntBASIC3.28□□□□□ -1.88
SEMA3DO95025 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SEMA3DO95025 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.28□□□□□ -1.88
SEMA3DO95025 AL035458.1-201ENST00000433096 585 ntBASIC3.28□□□□□ -1.88
SEMA3DO95025 AL691517.1-201ENST00000440833 1235 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms