Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC092809.1-201ENST00000441469 474 ntBASIC1.31□□□□□ -2.2
USH2AO75445 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC1.31□□□□□ -2.2
USH2AO75445 AC116337.1-201ENST00000509680 687 ntBASIC1.31□□□□□ -2.2
USH2AO75445 RN7SKP219-201ENST00000516825 296 ntBASIC1.31□□□□□ -2.2
USH2AO75445 SCARNA20.6-201ENST00000517251 106 ntBASIC1.31□□□□□ -2.2
USH2AO75445 AC022884.3-201ENST00000579571 248 ntBASIC1.31□□□□□ -2.2
USH2AO75445 AC009948.4-201ENST00000604692 675 ntBASIC1.31□□□□□ -2.2
USH2AO75445 SNORD91B-202ENST00000608459 222 ntBASIC1.31□□□□□ -2.2
USH2AO75445 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC1.31□□□□□ -2.2
USH2AO75445 AL157817.1-201ENST00000614264 790 ntBASIC1.31□□□□□ -2.2
USH2AO75445 RPS4XP22-201ENST00000480755 780 ntBASIC1.31□□□□□ -2.2
USH2AO75445 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC1.31□□□□□ -2.2
USH2AO75445 RNU6-295P-201ENST00000516901 104 ntBASIC1.31□□□□□ -2.2
USH2AO75445 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC1.31□□□□□ -2.2
USH2AO75445 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
USH2AO75445 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.31□□□□□ -2.2
USH2AO75445 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.31□□□□□ -2.2
USH2AO75445 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC1.31□□□□□ -2.2
USH2AO75445 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
USH2AO75445 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC1.31□□□□□ -2.2
USH2AO75445 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC1.31□□□□□ -2.2
USH2AO75445 AC008725.1-201ENST00000605123 2263 ntBASIC1.31□□□□□ -2.2
USH2AO75445 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
USH2AO75445 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC1.31□□□□□ -2.2
USH2AO75445 SNORA36C-201ENST00000384289 132 ntBASIC1.31□□□□□ -2.2
USH2AO75445 RNU6-851P-201ENST00000384565 107 ntBASIC1.31□□□□□ -2.2
USH2AO75445 AL137014.1-201ENST00000420490 1226 ntBASIC1.31□□□□□ -2.2
USH2AO75445 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC1.31□□□□□ -2.2
USH2AO75445 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC1.31□□□□□ -2.2
USH2AO75445 RPL5P16-201ENST00000471467 790 ntBASIC1.31□□□□□ -2.2
USH2AO75445 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.31□□□□□ -2.2
USH2AO75445 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.31□□□□□ -2.2
USH2AO75445 VN1R9P-201ENST00000614184 867 ntBASIC1.31□□□□□ -2.2
USH2AO75445 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC1.31□□□□□ -2.2
USH2AO75445 FTX-214ENST00000638437 12267 ntTSL 5 BASIC1.3□□□□□ -2.2
USH2AO75445 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
USH2AO75445 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
USH2AO75445 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
USH2AO75445 AC000403.1-201ENST00000613696 3585 ntBASIC1.3□□□□□ -2.2
USH2AO75445 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.3□□□□□ -2.2
USH2AO75445 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
USH2AO75445 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
USH2AO75445 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
USH2AO75445 RNA5SP52-201ENST00000362448 134 ntBASIC1.3□□□□□ -2.2
USH2AO75445 CYCSP45-201ENST00000402289 315 ntBASIC1.3□□□□□ -2.2
USH2AO75445 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC1.3□□□□□ -2.2
USH2AO75445 AC126124.2-201ENST00000413542 321 ntBASIC1.3□□□□□ -2.2
USH2AO75445 HMGB3P20-201ENST00000417997 600 ntBASIC1.3□□□□□ -2.2
USH2AO75445 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC1.3□□□□□ -2.2
USH2AO75445 ATP5J2P3-201ENST00000451550 258 ntBASIC1.3□□□□□ -2.2
USH2AO75445 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC1.3□□□□□ -2.2
USH2AO75445 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.3□□□□□ -2.2
USH2AO75445 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.3□□□□□ -2.2
USH2AO75445 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC1.3□□□□□ -2.2
USH2AO75445 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC1.3□□□□□ -2.2
USH2AO75445 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
USH2AO75445 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
USH2AO75445 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC1.3□□□□□ -2.2
USH2AO75445 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
USH2AO75445 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
USH2AO75445 MIR133A2-201ENST00000347538 102 ntBASIC1.3□□□□□ -2.2
USH2AO75445 SYF2-202ENST00000354361 926 ntTSL 2 BASIC1.3□□□□□ -2.2
USH2AO75445 RNA5SP289-201ENST00000362332 137 ntBASIC1.3□□□□□ -2.2
USH2AO75445 MIR9-1-201ENST00000385198 89 ntBASIC1.3□□□□□ -2.2
USH2AO75445 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC1.3□□□□□ -2.2
USH2AO75445 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.3□□□□□ -2.2
USH2AO75445 ETF1P3-201ENST00000430422 1160 ntBASIC1.3□□□□□ -2.2
USH2AO75445 AL591473.1-201ENST00000464297 313 ntBASIC1.3□□□□□ -2.2
USH2AO75445 AP003102.1-201ENST00000525638 661 ntBASIC1.3□□□□□ -2.2
USH2AO75445 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC1.3□□□□□ -2.2
USH2AO75445 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC1.3□□□□□ -2.2
USH2AO75445 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.3□□□□□ -2.2
USH2AO75445 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.3□□□□□ -2.2
USH2AO75445 BNIP3P38-201ENST00000601117 544 ntBASIC1.3□□□□□ -2.2
USH2AO75445 AC090897.3-201ENST00000636973 1157 ntBASIC1.3□□□□□ -2.2
USH2AO75445 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
USH2AO75445 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
USH2AO75445 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
USH2AO75445 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
USH2AO75445 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
USH2AO75445 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC1.3□□□□□ -2.2
USH2AO75445 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
USH2AO75445 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
USH2AO75445 OR5H5P-201ENST00000503164 928 ntBASIC1.3□□□□□ -2.2
USH2AO75445 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
USH2AO75445 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.3□□□□□ -2.2
USH2AO75445 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC1.3□□□□□ -2.2
USH2AO75445 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
USH2AO75445 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
USH2AO75445 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
USH2AO75445 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
USH2AO75445 MORF4L1P6-201ENST00000418771 268 ntBASIC1.3□□□□□ -2.2
USH2AO75445 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
USH2AO75445 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.3□□□□□ -2.2
USH2AO75445 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.3□□□□□ -2.2
USH2AO75445 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.3□□□□□ -2.2
USH2AO75445 AC092608.2-201ENST00000624427 218 ntBASIC1.3□□□□□ -2.2
USH2AO75445 AC079228.1-201ENST00000624774 1049 ntBASIC1.3□□□□□ -2.2
USH2AO75445 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
USH2AO75445 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms