Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHOX2O60902 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHOX2O60902 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHOX2O60902 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.36□□□□□ -1.87
SHOX2O60902 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHOX2O60902 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SHOX2O60902 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHOX2O60902 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.36□□□□□ -1.87
SHOX2O60902 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.36□□□□□ -1.87
SHOX2O60902 SNORA3.3-201ENST00000408712 125 ntBASIC3.36□□□□□ -1.87
SHOX2O60902 AC012065.2-201ENST00000421295 375 ntBASIC3.36□□□□□ -1.87
SHOX2O60902 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.36□□□□□ -1.87
SHOX2O60902 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.36□□□□□ -1.87
SHOX2O60902 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.36□□□□□ -1.87
SHOX2O60902 HMGB3P6-201ENST00000444896 598 ntBASIC3.36□□□□□ -1.87
SHOX2O60902 RPL34P26-201ENST00000445636 354 ntBASIC3.36□□□□□ -1.87
SHOX2O60902 PPIAP3-201ENST00000450588 505 ntBASIC3.36□□□□□ -1.87
SHOX2O60902 RPS20P32-201ENST00000456044 356 ntBASIC3.36□□□□□ -1.87
SHOX2O60902 AC091179.1-201ENST00000461606 579 ntBASIC3.36□□□□□ -1.87
SHOX2O60902 TMED11P-201ENST00000479478 690 ntBASIC3.36□□□□□ -1.87
SHOX2O60902 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.36□□□□□ -1.87
SHOX2O60902 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
SHOX2O60902 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.36□□□□□ -1.87
SHOX2O60902 RN7SKP13-201ENST00000515933 244 ntBASIC3.36□□□□□ -1.87
SHOX2O60902 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.36□□□□□ -1.87
SHOX2O60902 PTP4A1P6-201ENST00000531034 478 ntBASIC3.36□□□□□ -1.87
SHOX2O60902 AC007536.1-201ENST00000533382 349 ntBASIC3.36□□□□□ -1.87
SHOX2O60902 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SHOX2O60902 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.36□□□□□ -1.87
SHOX2O60902 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.36□□□□□ -1.87
SHOX2O60902 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.36□□□□□ -1.87
SHOX2O60902 AC023158.1-201ENST00000561632 1025 ntBASIC3.36□□□□□ -1.87
SHOX2O60902 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.36□□□□□ -1.87
SHOX2O60902 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.36□□□□□ -1.87
SHOX2O60902 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.36□□□□□ -1.87
SHOX2O60902 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.36□□□□□ -1.87
SHOX2O60902 MIR6875-201ENST00000617506 72 ntBASIC3.36□□□□□ -1.87
SHOX2O60902 AC069209.1-201ENST00000619282 651 ntBASIC3.36□□□□□ -1.87
SHOX2O60902 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SHOX2O60902 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHOX2O60902 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.36□□□□□ -1.87
SHOX2O60902 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SHOX2O60902 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SHOX2O60902 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.35□□□□□ -1.87
SHOX2O60902 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SHOX2O60902 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.35□□□□□ -1.87
SHOX2O60902 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SHOX2O60902 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHOX2O60902 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SHOX2O60902 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHOX2O60902 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SHOX2O60902 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHOX2O60902 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
SHOX2O60902 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.35□□□□□ -1.87
SHOX2O60902 Y_RNA.500-201ENST00000384466 111 ntBASIC3.35□□□□□ -1.87
SHOX2O60902 MIR7-1-201ENST00000384871 110 ntBASIC3.35□□□□□ -1.87
SHOX2O60902 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.35□□□□□ -1.87
SHOX2O60902 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.35□□□□□ -1.87
SHOX2O60902 TRIAP1P1-201ENST00000427062 225 ntBASIC3.35□□□□□ -1.87
SHOX2O60902 AL390023.1-201ENST00000428836 262 ntBASIC3.35□□□□□ -1.87
SHOX2O60902 AC236972.1-201ENST00000433225 199 ntBASIC3.35□□□□□ -1.87
SHOX2O60902 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SHOX2O60902 CST9LP2-201ENST00000437612 320 ntBASIC3.35□□□□□ -1.87
SHOX2O60902 RPL37P3-201ENST00000456825 293 ntBASIC3.35□□□□□ -1.87
SHOX2O60902 RPL5P23-201ENST00000496040 868 ntBASIC3.35□□□□□ -1.87
SHOX2O60902 UBE2CP3-201ENST00000502715 450 ntBASIC3.35□□□□□ -1.87
SHOX2O60902 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.35□□□□□ -1.87
SHOX2O60902 AC026427.2-201ENST00000506228 536 ntBASIC3.35□□□□□ -1.87
SHOX2O60902 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.35□□□□□ -1.87
SHOX2O60902 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.35□□□□□ -1.87
SHOX2O60902 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.35□□□□□ -1.87
SHOX2O60902 AGGF1P6-201ENST00000569213 976 ntBASIC3.35□□□□□ -1.87
SHOX2O60902 AC087499.8-201ENST00000578406 226 ntBASIC3.35□□□□□ -1.87
SHOX2O60902 PCNAP1-202ENST00000595299 752 ntBASIC3.35□□□□□ -1.87
SHOX2O60902 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.35□□□□□ -1.87
SHOX2O60902 AC012119.1-201ENST00000603184 222 ntBASIC3.35□□□□□ -1.87
SHOX2O60902 AL451086.1-201ENST00000605596 223 ntBASIC3.35□□□□□ -1.87
SHOX2O60902 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
SHOX2O60902 MTND4P31-201ENST00000425607 1343 ntBASIC3.35□□□□□ -1.87
SHOX2O60902 GABPAP-201ENST00000419271 1356 ntBASIC3.35□□□□□ -1.87
SHOX2O60902 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SHOX2O60902 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.35□□□□□ -1.87
SHOX2O60902 AL133383.2-201ENST00000622958 2336 ntBASIC3.35□□□□□ -1.87
SHOX2O60902 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHOX2O60902 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHOX2O60902 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHOX2O60902 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
SHOX2O60902 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.34□□□□□ -1.87
SHOX2O60902 RNU6-452P-201ENST00000384406 107 ntBASIC3.34□□□□□ -1.87
SHOX2O60902 MIR181B1-201ENST00000385240 110 ntBASIC3.34□□□□□ -1.87
SHOX2O60902 RNA5SP229-201ENST00000410809 99 ntBASIC3.34□□□□□ -1.87
SHOX2O60902 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.34□□□□□ -1.87
SHOX2O60902 AC069157.1-201ENST00000421749 137 ntBASIC3.34□□□□□ -1.87
SHOX2O60902 AC008065.1-201ENST00000428525 348 ntBASIC3.34□□□□□ -1.87
SHOX2O60902 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.34□□□□□ -1.87
SHOX2O60902 AC018644.1-201ENST00000429934 551 ntBASIC3.34□□□□□ -1.87
SHOX2O60902 RPL21P89-201ENST00000444021 467 ntBASIC3.34□□□□□ -1.87
SHOX2O60902 AC092451.1-201ENST00000480211 153 ntBASIC3.34□□□□□ -1.87
SHOX2O60902 TPT1P3-201ENST00000492841 512 ntBASIC3.34□□□□□ -1.87
SHOX2O60902 FABP5P6-201ENST00000510588 409 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms