Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PRKNO60260 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.85□□□□□ -1.79
PRKNO60260 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRKNO60260 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PRKNO60260 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.85□□□□□ -1.79
PRKNO60260 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRKNO60260 AC087190.4-201ENST00000574616 8334 ntBASIC3.85□□□□□ -1.79
PRKNO60260 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.85□□□□□ -1.79
PRKNO60260 ELL2P3-201ENST00000457883 1602 ntBASIC3.84□□□□□ -1.79
PRKNO60260 AC105074.1-201ENST00000623380 3095 ntBASIC3.84□□□□□ -1.79
PRKNO60260 AC026951.1-201ENST00000559530 2459 ntBASIC3.84□□□□□ -1.79
PRKNO60260 FAM91A3P-201ENST00000456826 2544 ntBASIC3.84□□□□□ -1.79
PRKNO60260 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PRKNO60260 AL049555.1-201ENST00000562834 1933 ntBASIC3.84□□□□□ -1.79
PRKNO60260 MAPK10-320ENST00000641462 6696 ntBASIC3.84□□□□□ -1.79
PRKNO60260 AC116667.1-201ENST00000604855 2072 ntBASIC3.84□□□□□ -1.79
PRKNO60260 RNU6-931P-201ENST00000363850 107 ntBASIC3.84□□□□□ -1.79
PRKNO60260 RNU6-553P-201ENST00000364047 96 ntBASIC3.84□□□□□ -1.79
PRKNO60260 RNU6-621P-201ENST00000364752 109 ntBASIC3.84□□□□□ -1.79
PRKNO60260 SUGT1P1-201ENST00000379514 476 ntBASIC3.84□□□□□ -1.79
PRKNO60260 MIR1179-201ENST00000408703 91 ntBASIC3.84□□□□□ -1.79
PRKNO60260 FCF1P2-201ENST00000415284 583 ntBASIC3.84□□□□□ -1.79
PRKNO60260 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.84□□□□□ -1.79
PRKNO60260 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.84□□□□□ -1.79
PRKNO60260 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PRKNO60260 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.84□□□□□ -1.79
PRKNO60260 AL022400.1-201ENST00000423946 935 ntBASIC3.84□□□□□ -1.79
PRKNO60260 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.84□□□□□ -1.79
PRKNO60260 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.84□□□□□ -1.79
PRKNO60260 RPL23AP46-201ENST00000438548 490 ntBASIC3.84□□□□□ -1.79
PRKNO60260 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.84□□□□□ -1.79
PRKNO60260 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.84□□□□□ -1.79
PRKNO60260 AC118469.1-201ENST00000442943 488 ntBASIC3.84□□□□□ -1.79
PRKNO60260 RPS27AP8-201ENST00000452665 445 ntBASIC3.84□□□□□ -1.79
PRKNO60260 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.84□□□□□ -1.79
PRKNO60260 RN7SL604P-201ENST00000492589 296 ntBASIC3.84□□□□□ -1.79
PRKNO60260 AC147055.4-201ENST00000504399 745 ntBASIC3.84□□□□□ -1.79
PRKNO60260 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.84□□□□□ -1.79
PRKNO60260 HSPE1P23-201ENST00000509838 286 ntBASIC3.84□□□□□ -1.79
PRKNO60260 XKRY-201ENST00000510392 1100 ntBASIC3.84□□□□□ -1.79
PRKNO60260 OR5BM1P-201ENST00000512021 366 ntBASIC3.84□□□□□ -1.79
PRKNO60260 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.84□□□□□ -1.79
PRKNO60260 AC117532.1-201ENST00000514638 323 ntBASIC3.84□□□□□ -1.79
PRKNO60260 HNRNPKP5-201ENST00000515300 253 ntBASIC3.84□□□□□ -1.79
PRKNO60260 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.84□□□□□ -1.79
PRKNO60260 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.84□□□□□ -1.79
PRKNO60260 AC093519.1-201ENST00000566109 298 ntBASIC3.84□□□□□ -1.79
PRKNO60260 MIR3160-1-201ENST00000577972 85 ntBASIC3.84□□□□□ -1.79
PRKNO60260 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.84□□□□□ -1.79
PRKNO60260 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.84□□□□□ -1.79
PRKNO60260 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.84□□□□□ -1.79
PRKNO60260 AC017100.2-201ENST00000584628 355 ntBASIC3.84□□□□□ -1.79
PRKNO60260 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.84□□□□□ -1.79
PRKNO60260 DUXAP11-201ENST00000603858 526 ntBASIC3.84□□□□□ -1.79
PRKNO60260 AC010738.1-201ENST00000604970 987 ntBASIC3.84□□□□□ -1.79
PRKNO60260 AC105129.3-201ENST00000605455 485 ntBASIC3.84□□□□□ -1.79
PRKNO60260 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.84□□□□□ -1.79
PRKNO60260 AC092653.1-201ENST00000608509 531 ntBASIC3.84□□□□□ -1.79
PRKNO60260 AF246928.1-201ENST00000623768 87 ntBASIC3.84□□□□□ -1.79
PRKNO60260 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.84□□□□□ -1.79
PRKNO60260 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.84□□□□□ -1.79
PRKNO60260 AC107982.1-201ENST00000507171 1300 ntBASIC3.84□□□□□ -1.79
PRKNO60260 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
PRKNO60260 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.79
PRKNO60260 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
PRKNO60260 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PRKNO60260 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
PRKNO60260 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
PRKNO60260 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PRKNO60260 RLIMP1-201ENST00000339626 1680 ntBASIC3.84□□□□□ -1.8
PRKNO60260 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.84□□□□□ -1.8
PRKNO60260 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
PRKNO60260 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
PRKNO60260 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
PRKNO60260 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PRKNO60260 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
PRKNO60260 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
PRKNO60260 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.83□□□□□ -1.8
PRKNO60260 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
PRKNO60260 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
PRKNO60260 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PRKNO60260 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PRKNO60260 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
PRKNO60260 AL391994.1-201ENST00000254724 282 ntBASIC3.83□□□□□ -1.8
PRKNO60260 SPRR2C-201ENST00000290702 219 ntBASIC3.83□□□□□ -1.8
PRKNO60260 OR11H4-201ENST00000315409 1082 ntBASIC3.83□□□□□ -1.8
PRKNO60260 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PRKNO60260 RNU6-115P-201ENST00000364310 107 ntBASIC3.83□□□□□ -1.8
PRKNO60260 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PRKNO60260 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.83□□□□□ -1.8
PRKNO60260 PRRC2CP1-201ENST00000404428 159 ntBASIC3.83□□□□□ -1.8
PRKNO60260 AL021407.1-201ENST00000404531 386 ntBASIC3.83□□□□□ -1.8
PRKNO60260 MIR1193-201ENST00000408109 78 ntBASIC3.83□□□□□ -1.8
PRKNO60260 AC068533.2-201ENST00000411872 306 ntBASIC3.83□□□□□ -1.8
PRKNO60260 LUZP4P1-201ENST00000415420 344 ntBASIC3.83□□□□□ -1.8
PRKNO60260 CYCSP10-201ENST00000417973 294 ntBASIC3.83□□□□□ -1.8
PRKNO60260 MTCO3P1-205ENST00000422088 832 ntBASIC3.83□□□□□ -1.8
PRKNO60260 RPL31P54-201ENST00000429803 370 ntBASIC3.83□□□□□ -1.8
PRKNO60260 VN1R108P-201ENST00000431580 830 ntBASIC3.83□□□□□ -1.8
PRKNO60260 AC010881.1-201ENST00000433830 235 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms