Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RRP9O43818 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RRP9O43818 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RRP9O43818 RNU6-660P-201ENST00000364566 109 ntBASIC4.71□□□□□ -1.66
RRP9O43818 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RRP9O43818 RNU6-441P-201ENST00000384545 106 ntBASIC4.71□□□□□ -1.66
RRP9O43818 RN7SKP285-201ENST00000410137 318 ntBASIC4.71□□□□□ -1.66
RRP9O43818 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.71□□□□□ -1.66
RRP9O43818 AIMP1P1-201ENST00000418670 937 ntBASIC4.71□□□□□ -1.66
RRP9O43818 OR2B7P-201ENST00000429302 934 ntBASIC4.71□□□□□ -1.66
RRP9O43818 RPL36P19-201ENST00000430744 301 ntBASIC4.71□□□□□ -1.66
RRP9O43818 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.71□□□□□ -1.66
RRP9O43818 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.71□□□□□ -1.66
RRP9O43818 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.71□□□□□ -1.66
RRP9O43818 MTND4P6-201ENST00000438297 472 ntBASIC4.71□□□□□ -1.66
RRP9O43818 COX6CP2-201ENST00000444980 225 ntBASIC4.71□□□□□ -1.66
RRP9O43818 AC000111.2-201ENST00000448200 210 ntBASIC4.71□□□□□ -1.66
RRP9O43818 TRGVB-201ENST00000453257 471 ntBASIC4.71□□□□□ -1.66
RRP9O43818 NDUFA12P1-201ENST00000455914 406 ntBASIC4.71□□□□□ -1.66
RRP9O43818 MTCO3P2-201ENST00000457365 171 ntBASIC4.71□□□□□ -1.66
RRP9O43818 ARPC3P2-201ENST00000457786 533 ntBASIC4.71□□□□□ -1.66
RRP9O43818 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RRP9O43818 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.71□□□□□ -1.66
RRP9O43818 AC006499.5-201ENST00000505037 514 ntBASIC4.71□□□□□ -1.66
RRP9O43818 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RRP9O43818 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.71□□□□□ -1.66
RRP9O43818 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RRP9O43818 AC091965.2-201ENST00000512324 613 ntBASIC4.71□□□□□ -1.66
RRP9O43818 MTND4LP31-201ENST00000514859 294 ntBASIC4.71□□□□□ -1.66
RRP9O43818 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.71□□□□□ -1.66
RRP9O43818 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.71□□□□□ -1.66
RRP9O43818 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.71□□□□□ -1.66
RRP9O43818 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.71□□□□□ -1.66
RRP9O43818 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.71□□□□□ -1.66
RRP9O43818 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.71□□□□□ -1.66
RRP9O43818 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.71□□□□□ -1.66
RRP9O43818 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.71□□□□□ -1.66
RRP9O43818 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.71□□□□□ -1.66
RRP9O43818 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.71□□□□□ -1.66
RRP9O43818 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.71□□□□□ -1.66
RRP9O43818 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.71□□□□□ -1.66
RRP9O43818 KPNA2P3-201ENST00000584190 848 ntBASIC4.71□□□□□ -1.66
RRP9O43818 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.71□□□□□ -1.66
RRP9O43818 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.71□□□□□ -1.66
RRP9O43818 RNU6-88P-201ENST00000606801 100 ntBASIC4.71□□□□□ -1.66
RRP9O43818 AC108673.3-201ENST00000609183 335 ntBASIC4.71□□□□□ -1.66
RRP9O43818 AP000894.4-201ENST00000610185 483 ntBASIC4.71□□□□□ -1.66
RRP9O43818 AL359535.1-201ENST00000612100 1087 ntBASIC4.71□□□□□ -1.66
RRP9O43818 RNVU1-4-201ENST00000612985 164 ntBASIC4.71□□□□□ -1.66
RRP9O43818 AL133243.1-201ENST00000614487 366 ntBASIC4.71□□□□□ -1.66
RRP9O43818 AC008115.3-201ENST00000614874 549 ntBASIC4.71□□□□□ -1.66
RRP9O43818 AC090582.1-201ENST00000636321 199 ntBASIC4.71□□□□□ -1.66
RRP9O43818 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RRP9O43818 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
RRP9O43818 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
RRP9O43818 MAPK10-373ENST00000641983 6772 ntBASIC4.71□□□□□ -1.66
RRP9O43818 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RRP9O43818 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RRP9O43818 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RRP9O43818 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.7□□□□□ -1.66
RRP9O43818 AC117529.2-201ENST00000512159 2068 ntBASIC4.7□□□□□ -1.66
RRP9O43818 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RRP9O43818 RNU4-21P-201ENST00000362802 126 ntBASIC4.7□□□□□ -1.66
RRP9O43818 RNA5SP307-201ENST00000362863 116 ntBASIC4.7□□□□□ -1.66
RRP9O43818 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RRP9O43818 MIR649-201ENST00000384843 97 ntBASIC4.7□□□□□ -1.66
RRP9O43818 SNRPEP2-201ENST00000397592 279 ntBASIC4.7□□□□□ -1.66
RRP9O43818 HMGN1P20-201ENST00000411849 300 ntBASIC4.7□□□□□ -1.66
RRP9O43818 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.7□□□□□ -1.66
RRP9O43818 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.7□□□□□ -1.66
RRP9O43818 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.7□□□□□ -1.66
RRP9O43818 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.7□□□□□ -1.66
RRP9O43818 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.7□□□□□ -1.66
RRP9O43818 AL353706.1-201ENST00000436728 494 ntBASIC4.7□□□□□ -1.66
RRP9O43818 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RRP9O43818 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.7□□□□□ -1.66
RRP9O43818 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.7□□□□□ -1.66
RRP9O43818 OR52J1P-201ENST00000450596 932 ntBASIC4.7□□□□□ -1.66
RRP9O43818 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.7□□□□□ -1.66
RRP9O43818 AC092757.1-201ENST00000467293 467 ntBASIC4.7□□□□□ -1.66
RRP9O43818 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.7□□□□□ -1.66
RRP9O43818 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.7□□□□□ -1.66
RRP9O43818 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.7□□□□□ -1.66
RRP9O43818 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.7□□□□□ -1.66
RRP9O43818 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.7□□□□□ -1.66
RRP9O43818 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.7□□□□□ -1.66
RRP9O43818 RNA5SP373-201ENST00000517271 95 ntBASIC4.7□□□□□ -1.66
RRP9O43818 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.7□□□□□ -1.66
RRP9O43818 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.7□□□□□ -1.66
RRP9O43818 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.7□□□□□ -1.66
RRP9O43818 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.7□□□□□ -1.66
RRP9O43818 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.7□□□□□ -1.66
RRP9O43818 OR5AN2P-201ENST00000534535 896 ntBASIC4.7□□□□□ -1.66
RRP9O43818 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.7□□□□□ -1.66
RRP9O43818 AC079600.1-201ENST00000550326 297 ntBASIC4.7□□□□□ -1.66
RRP9O43818 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.7□□□□□ -1.66
RRP9O43818 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.7□□□□□ -1.66
RRP9O43818 AC063949.1-201ENST00000552900 865 ntBASIC4.7□□□□□ -1.66
RRP9O43818 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.7□□□□□ -1.66
RRP9O43818 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms