Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CUX2O14529 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.32□□□□□ -1.56
CUX2O14529 RNU6-1331P-201ENST00000363658 106 ntBASIC5.32□□□□□ -1.56
CUX2O14529 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.32□□□□□ -1.56
CUX2O14529 AC012065.2-201ENST00000421295 375 ntBASIC5.32□□□□□ -1.56
CUX2O14529 AC016696.1-201ENST00000446949 318 ntBASIC5.32□□□□□ -1.56
CUX2O14529 ACTG1P13-201ENST00000486987 1043 ntBASIC5.32□□□□□ -1.56
CUX2O14529 RPS6P4-201ENST00000494693 758 ntBASIC5.32□□□□□ -1.56
CUX2O14529 FCF1P3-201ENST00000496394 590 ntBASIC5.32□□□□□ -1.56
CUX2O14529 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.32□□□□□ -1.56
CUX2O14529 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.32□□□□□ -1.56
CUX2O14529 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.32□□□□□ -1.56
CUX2O14529 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.32□□□□□ -1.56
CUX2O14529 AC015917.1-201ENST00000579654 510 ntBASIC5.32□□□□□ -1.56
CUX2O14529 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.32□□□□□ -1.56
CUX2O14529 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.32□□□□□ -1.56
CUX2O14529 AC010680.4-201ENST00000605334 543 ntBASIC5.32□□□□□ -1.56
CUX2O14529 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CUX2O14529 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CUX2O14529 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CUX2O14529 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CUX2O14529 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CUX2O14529 AC073325.2-201ENST00000339545 159 ntBASIC5.31□□□□□ -1.56
CUX2O14529 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CUX2O14529 AL034379.1-201ENST00000423216 253 ntBASIC5.31□□□□□ -1.56
CUX2O14529 MTCO1P39-201ENST00000426148 480 ntBASIC5.31□□□□□ -1.56
CUX2O14529 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.31□□□□□ -1.56
CUX2O14529 MTCYBP14-201ENST00000457471 715 ntBASIC5.31□□□□□ -1.56
CUX2O14529 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.31□□□□□ -1.56
CUX2O14529 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
CUX2O14529 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.31□□□□□ -1.56
CUX2O14529 MIR4738-201ENST00000579134 87 ntBASIC5.31□□□□□ -1.56
CUX2O14529 AC009948.4-201ENST00000604692 675 ntBASIC5.31□□□□□ -1.56
CUX2O14529 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.31□□□□□ -1.56
CUX2O14529 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
CUX2O14529 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CUX2O14529 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC5.3□□□□□ -1.56
CUX2O14529 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CUX2O14529 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CUX2O14529 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CUX2O14529 MIR1289-2-201ENST00000408360 111 ntBASIC5.3□□□□□ -1.56
CUX2O14529 MIR1287-201ENST00000408492 90 ntBASIC5.3□□□□□ -1.56
CUX2O14529 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.3□□□□□ -1.56
CUX2O14529 AC069540.1-201ENST00000446320 988 ntBASIC5.3□□□□□ -1.56
CUX2O14529 SEC11B-201ENST00000518383 499 ntBASIC5.3□□□□□ -1.56
CUX2O14529 AC025857.1-201ENST00000525252 377 ntBASIC5.3□□□□□ -1.56
CUX2O14529 AC044913.1-201ENST00000557200 430 ntBASIC5.3□□□□□ -1.56
CUX2O14529 AL049874.4-201ENST00000557593 255 ntBASIC5.3□□□□□ -1.56
CUX2O14529 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC5.3□□□□□ -1.56
CUX2O14529 CYCSP39-201ENST00000565821 309 ntBASIC5.3□□□□□ -1.56
CUX2O14529 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CUX2O14529 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.3□□□□□ -1.56
CUX2O14529 USP33-201ENST00000357428 4155 ntTSL 5 BASIC5.3□□□□□ -1.56
CUX2O14529 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC5.3□□□□□ -1.56
CUX2O14529 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CUX2O14529 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CUX2O14529 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CUX2O14529 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CUX2O14529 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CUX2O14529 Y_RNA.164-201ENST00000363709 102 ntBASIC5.29□□□□□ -1.56
CUX2O14529 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.29□□□□□ -1.56
CUX2O14529 VN1R31P-201ENST00000417498 730 ntBASIC5.29□□□□□ -1.56
CUX2O14529 UBE2D3P1-201ENST00000436669 444 ntBASIC5.29□□□□□ -1.56
CUX2O14529 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.29□□□□□ -1.56
CUX2O14529 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.29□□□□□ -1.56
CUX2O14529 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.29□□□□□ -1.56
CUX2O14529 SEPT7P6-201ENST00000469999 1143 ntBASIC5.29□□□□□ -1.56
CUX2O14529 SNORA70.19-201ENST00000516717 90 ntBASIC5.29□□□□□ -1.56
CUX2O14529 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.29□□□□□ -1.56
CUX2O14529 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.29□□□□□ -1.56
CUX2O14529 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.29□□□□□ -1.56
CUX2O14529 AC017071.1-201ENST00000564407 2204 ntBASIC5.29□□□□□ -1.56
CUX2O14529 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CUX2O14529 AC046143.2-201ENST00000609789 160 ntBASIC5.29□□□□□ -1.56
CUX2O14529 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
CUX2O14529 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CUX2O14529 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
CUX2O14529 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC5.28□□□□□ -1.56
CUX2O14529 MTND5P23-201ENST00000430812 1655 ntBASIC5.28□□□□□ -1.56
CUX2O14529 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CUX2O14529 RNU6-859P-201ENST00000362728 107 ntBASIC5.28□□□□□ -1.56
CUX2O14529 RNA5SP99-201ENST00000364020 114 ntBASIC5.28□□□□□ -1.56
CUX2O14529 AC098592.2-201ENST00000413158 265 ntBASIC5.28□□□□□ -1.56
CUX2O14529 MTCO3P20-201ENST00000454926 688 ntBASIC5.28□□□□□ -1.56
CUX2O14529 AC107934.2-201ENST00000518653 310 ntBASIC5.28□□□□□ -1.56
CUX2O14529 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.28□□□□□ -1.56
CUX2O14529 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.28□□□□□ -1.56
CUX2O14529 AP000859.1-201ENST00000525536 307 ntBASIC5.28□□□□□ -1.56
CUX2O14529 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.28□□□□□ -1.56
CUX2O14529 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.28□□□□□ -1.56
CUX2O14529 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.28□□□□□ -1.56
CUX2O14529 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.28□□□□□ -1.56
CUX2O14529 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CUX2O14529 RPL7P26-201ENST00000333817 754 ntBASIC5.27□□□□□ -1.57
CUX2O14529 Y_RNA.796-201ENST00000364268 102 ntBASIC5.27□□□□□ -1.57
CUX2O14529 Y_RNA.799-201ENST00000364992 102 ntBASIC5.27□□□□□ -1.57
CUX2O14529 HMGB3P18-201ENST00000406327 590 ntBASIC5.27□□□□□ -1.57
CUX2O14529 RNU2-52P-201ENST00000410680 190 ntBASIC5.27□□□□□ -1.57
CUX2O14529 OR6C72P-201ENST00000451403 892 ntBASIC5.27□□□□□ -1.57
CUX2O14529 OR7L1P-201ENST00000456181 380 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms