Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
O00370 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
O00370 AC046144.1-201ENST00000478559 1853 ntBASIC4.07□□□□□ -1.76
O00370 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.07□□□□□ -1.76
O00370 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.07□□□□□ -1.76
O00370 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.07□□□□□ -1.76
O00370 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
O00370 AC007685.1-201ENST00000329806 452 ntBASIC4.07□□□□□ -1.76
O00370 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
O00370 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
O00370 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
O00370 SNORD116-12-201ENST00000384468 92 ntBASIC4.07□□□□□ -1.76
O00370 SNORA57.1-201ENST00000391227 145 ntBASIC4.07□□□□□ -1.76
O00370 ATP5F1P4-201ENST00000397288 746 ntBASIC4.07□□□□□ -1.76
O00370 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
O00370 PRRC2CP1-201ENST00000404428 159 ntBASIC4.07□□□□□ -1.76
O00370 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.07□□□□□ -1.76
O00370 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.07□□□□□ -1.76
O00370 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.07□□□□□ -1.76
O00370 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
O00370 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.07□□□□□ -1.76
O00370 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.07□□□□□ -1.76
O00370 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.07□□□□□ -1.76
O00370 OR4F13P-201ENST00000428478 931 ntBASIC4.07□□□□□ -1.76
O00370 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
O00370 PTGES3P1-201ENST00000439531 483 ntBASIC4.07□□□□□ -1.76
O00370 RPS29P7-201ENST00000439662 171 ntBASIC4.07□□□□□ -1.76
O00370 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.07□□□□□ -1.76
O00370 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.07□□□□□ -1.76
O00370 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
O00370 AC084198.1-201ENST00000477747 402 ntBASIC4.07□□□□□ -1.76
O00370 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.07□□□□□ -1.76
O00370 AC004069.2-201ENST00000505438 1114 ntBASIC4.07□□□□□ -1.76
O00370 AC113420.1-201ENST00000507903 571 ntBASIC4.07□□□□□ -1.76
O00370 AC021146.1-201ENST00000511202 716 ntBASIC4.07□□□□□ -1.76
O00370 RNA5SP208-201ENST00000516156 78 ntBASIC4.07□□□□□ -1.76
O00370 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.07□□□□□ -1.76
O00370 OR8I1P-201ENST00000529291 931 ntBASIC4.07□□□□□ -1.76
O00370 OR6C73P-201ENST00000546432 358 ntBASIC4.07□□□□□ -1.76
O00370 CYCSP30-201ENST00000546447 172 ntBASIC4.07□□□□□ -1.76
O00370 SERPINE4P-201ENST00000554978 281 ntBASIC4.07□□□□□ -1.76
O00370 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.07□□□□□ -1.76
O00370 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.07□□□□□ -1.76
O00370 VN1R88P-201ENST00000596787 292 ntBASIC4.07□□□□□ -1.76
O00370 AC244505.7-201ENST00000599675 272 ntBASIC4.07□□□□□ -1.76
O00370 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.07□□□□□ -1.76
O00370 AL445435.1-201ENST00000604232 665 ntBASIC4.07□□□□□ -1.76
O00370 AL109618.2-201ENST00000605527 211 ntBASIC4.07□□□□□ -1.76
O00370 AC099676.1-201ENST00000608886 657 ntBASIC4.07□□□□□ -1.76
O00370 AC104985.3-201ENST00000623479 597 ntBASIC4.07□□□□□ -1.76
O00370 AL109659.3-201ENST00000624985 950 ntBASIC4.07□□□□□ -1.76
O00370 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
O00370 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.07□□□□□ -1.76
O00370 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
O00370 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
O00370 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
O00370 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.07□□□□□ -1.76
O00370 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
O00370 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
O00370 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
O00370 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
O00370 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
O00370 AC016716.1-201ENST00000265882 708 ntBASIC4.06□□□□□ -1.76
O00370 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
O00370 ANKRD36P1-201ENST00000344424 659 ntBASIC4.06□□□□□ -1.76
O00370 OR1L1-202ENST00000373686 1083 ntBASIC4.06□□□□□ -1.76
O00370 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.06□□□□□ -1.76
O00370 RNU2-21P-201ENST00000410368 188 ntBASIC4.06□□□□□ -1.76
O00370 RPL30P2-201ENST00000414021 291 ntBASIC4.06□□□□□ -1.76
O00370 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.06□□□□□ -1.76
O00370 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.06□□□□□ -1.76
O00370 NANOGP5-201ENST00000424456 877 ntBASIC4.06□□□□□ -1.76
O00370 HIGD1AP12-201ENST00000427832 281 ntBASIC4.06□□□□□ -1.76
O00370 AC092634.2-201ENST00000428146 1010 ntBASIC4.06□□□□□ -1.76
O00370 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.06□□□□□ -1.76
O00370 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.06□□□□□ -1.76
O00370 RRM2P4-201ENST00000441721 562 ntBASIC4.06□□□□□ -1.76
O00370 AC004865.1-201ENST00000442276 1003 ntBASIC4.06□□□□□ -1.76
O00370 AL031313.1-201ENST00000448435 256 ntBASIC4.06□□□□□ -1.76
O00370 RPL29P29-201ENST00000448725 423 ntBASIC4.06□□□□□ -1.76
O00370 RPL23AP15-201ENST00000450202 459 ntBASIC4.06□□□□□ -1.76
O00370 NPM1P13-201ENST00000452663 865 ntBASIC4.06□□□□□ -1.76
O00370 RPL9P32-201ENST00000464118 620 ntBASIC4.06□□□□□ -1.76
O00370 AC015724.1-201ENST00000478577 156 ntBASIC4.06□□□□□ -1.76
O00370 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.06□□□□□ -1.76
O00370 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.06□□□□□ -1.76
O00370 RAC1P2-201ENST00000511164 579 ntBASIC4.06□□□□□ -1.76
O00370 RNU2-58P-201ENST00000516403 183 ntBASIC4.06□□□□□ -1.76
O00370 AC008802.1-201ENST00000519121 791 ntBASIC4.06□□□□□ -1.76
O00370 AP001207.2-201ENST00000519490 539 ntBASIC4.06□□□□□ -1.76
O00370 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.06□□□□□ -1.76
O00370 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.06□□□□□ -1.76
O00370 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
O00370 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.06□□□□□ -1.76
O00370 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.06□□□□□ -1.76
O00370 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
O00370 AC044913.1-201ENST00000557200 430 ntBASIC4.06□□□□□ -1.76
O00370 BNIP3P5-201ENST00000562290 498 ntBASIC4.06□□□□□ -1.76
O00370 MIR1254-2-201ENST00000579553 63 ntBASIC4.06□□□□□ -1.76
O00370 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms