Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 RPS12P10-201ENST00000427031 377 ntBASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 AC011742.1-201ENST00000431448 434 ntBASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 RAD23BP3-201ENST00000454157 1152 ntBASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 MTCO3P11-201ENST00000455103 774 ntBASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 SUMO2P2-201ENST00000456482 255 ntBASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 AC090453.1-201ENST00000495560 436 ntBASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 SLC2A13P1-201ENST00000531560 322 ntBASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 RN7SL339P-201ENST00000580597 296 ntBASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 AC106791.2-201ENST00000604680 391 ntBASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 AP003392.5-201ENST00000607857 415 ntBASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 AC009570.1-201ENST00000609599 745 ntBASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 MIR486-1-201ENST00000612171 68 ntBASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 PART1_2.1-201ENST00000612397 250 ntBASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 AC024257.5-201ENST00000612739 531 ntBASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 AC006065.6-201ENST00000625201 545 ntBASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 BDP1P-201ENST00000582658 1990 ntBASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 MTND4P10-201ENST00000446199 1363 ntBASIC4.39□□□□□ -1.71
HMGB1P1B2RPK0 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 AC011460.1-201ENST00000636268 1834 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 AC021146.4-201ENST00000309229 279 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 RN7SKP95-201ENST00000362860 303 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 FAT1P1-201ENST00000406588 507 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 RNU6-1077P-201ENST00000410506 102 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 RNA5SP38-201ENST00000410750 119 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 RSU1P3-201ENST00000412878 835 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 CHEK2P3-201ENST00000416118 248 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 RPL21P32-201ENST00000419877 477 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 OSTCP5-201ENST00000425293 453 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 MTATP6P4-201ENST00000427725 675 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 AC024082.2-201ENST00000434771 238 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 THAP5P1-201ENST00000439089 262 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 AC114495.1-201ENST00000441274 436 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 HSPE1P28-201ENST00000443139 211 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 HMGB3P6-201ENST00000444896 598 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 AL353691.1-201ENST00000451332 387 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 SBDSP1-204ENST00000453858 737 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 RPS27AP17-201ENST00000463344 455 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 AC108860.1-201ENST00000484521 383 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 AC096571.1-202ENST00000506634 735 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 AP001207.2-201ENST00000519490 539 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 AC022861.1-201ENST00000522981 663 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 FAM60DP-201ENST00000524174 632 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 YWHAZP1-201ENST00000556286 722 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 AL133393.1-201ENST00000603277 287 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 DUXAP11-201ENST00000603858 526 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 SNORA51-201ENST00000606420 132 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 AC090948.1-201ENST00000607464 549 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 AC128687.2-201ENST00000609657 566 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 AC025588.4-201ENST00000615802 908 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 MIR6891-201ENST00000618788 93 ntBASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMGB1P1B2RPK0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HMGB1P1B2RPK0 AC092326.2-201ENST00000624772 1561 ntBASIC4.37□□□□□ -1.71
HMGB1P1B2RPK0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGB1P1B2RPK0 FRG1BP-201ENST00000278882 761 ntBASIC4.37□□□□□ -1.71
HMGB1P1B2RPK0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGB1P1B2RPK0 RNU6-1122P-201ENST00000384449 107 ntBASIC4.37□□□□□ -1.71
HMGB1P1B2RPK0 AC068533.2-201ENST00000411872 306 ntBASIC4.37□□□□□ -1.71
HMGB1P1B2RPK0 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGB1P1B2RPK0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.37□□□□□ -1.71
HMGB1P1B2RPK0 Z75741.2-201ENST00000417272 1167 ntBASIC4.37□□□□□ -1.71
HMGB1P1B2RPK0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.37□□□□□ -1.71
HMGB1P1B2RPK0 NRBF2P3-201ENST00000432731 865 ntBASIC4.37□□□□□ -1.71
HMGB1P1B2RPK0 RPL23AP93-201ENST00000440847 484 ntBASIC4.37□□□□□ -1.71
HMGB1P1B2RPK0 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMGB1P1B2RPK0 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGB1P1B2RPK0 RPL36AP33-201ENST00000450395 310 ntBASIC4.37□□□□□ -1.71
HMGB1P1B2RPK0 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.37□□□□□ -1.71
HMGB1P1B2RPK0 TRGVB-201ENST00000453257 471 ntBASIC4.37□□□□□ -1.71
HMGB1P1B2RPK0 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGB1P1B2RPK0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.37□□□□□ -1.71
HMGB1P1B2RPK0 AC093278.1-201ENST00000494700 600 ntBASIC4.37□□□□□ -1.71
HMGB1P1B2RPK0 MTND4LP2-201ENST00000502312 285 ntBASIC4.37□□□□□ -1.71
HMGB1P1B2RPK0 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms