Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 AC026427.2-201ENST00000506228 536 ntBASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 AL606834.2-201ENST00000602954 668 ntBASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 AL162713.1-201ENST00000604480 262 ntBASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 AL356321.1-201ENST00000621360 228 ntBASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 CR392039.4-201ENST00000624968 501 ntBASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 TNPO1P3-201ENST00000436471 2662 ntBASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 UBE2V1P11-201ENST00000411559 285 ntBASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 AC002075.2-201ENST00000425207 252 ntBASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 FO393414.1-201ENST00000428697 1184 ntBASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 MTCO1P43-201ENST00000431831 488 ntBASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 AC091862.1-201ENST00000438016 1100 ntBASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 AL158053.1-201ENST00000441503 453 ntBASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 RPS26P30-201ENST00000443431 335 ntBASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 MOB1AP2-201ENST00000446060 614 ntBASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 AL096829.2-201ENST00000446582 742 ntBASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 AC008264.1-201ENST00000447612 367 ntBASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 AC092685.1-201ENST00000447960 1243 ntBASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 TPMTP4-201ENST00000450749 678 ntBASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 TRBV8-2-201ENST00000475637 270 ntBASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 AL035404.1-201ENST00000497982 568 ntBASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 HMGB1P21-201ENST00000502313 581 ntBASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 APOOP4-201ENST00000513530 597 ntBASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 RN7SKP57-201ENST00000517248 293 ntBASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 AC083923.1-201ENST00000523708 376 ntBASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 C1DP5-201ENST00000525775 383 ntBASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 AC139103.1-201ENST00000534696 1030 ntBASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 NF1P5-201ENST00000588287 448 ntBASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 AC084824.5-201ENST00000612009 413 ntBASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SMIM28A0A1B0GU29 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 AC018529.3-201ENST00000624212 2254 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 AL356489.2-201ENST00000566968 3528 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 ENSAP3-201ENST00000312710 333 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 RNA5SP27-201ENST00000363839 119 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 SNORA38.1-201ENST00000364172 131 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 TAF9BP1-201ENST00000396646 746 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 AL158071.1-201ENST00000430315 461 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 ETF1P3-201ENST00000430422 1160 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 ATP5C1P1-201ENST00000441945 895 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 RPS4XP2-201ENST00000458402 793 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 AC092902.1-201ENST00000486999 259 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 AC112518.2-201ENST00000508565 425 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 RN7SKP116-201ENST00000516902 319 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 AC092451.2-201ENST00000538746 658 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 OR4U1P-201ENST00000554958 912 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 AL161713.1-201ENST00000555538 145 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 RPL21P12-201ENST00000559810 515 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 AC093510.2-201ENST00000562820 896 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 AC090079.2-201ENST00000575289 768 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 MIR5680-201ENST00000577577 84 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 BNIP3P19-201ENST00000605397 577 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 AC009464.1-201ENST00000615731 469 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms