Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.36□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AL356118.1-201ENST00000635272 1078 ntBASIC3.36□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC006504.1-201ENST00000562493 3666 ntBASIC3.36□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC000367.1-201ENST00000452711 1766 ntBASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 SNORA71.3-201ENST00000362582 128 ntBASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 MIR218-2-201ENST00000385006 110 ntBASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 RNU6-796P-201ENST00000391086 107 ntBASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 MTND4P22-201ENST00000413116 1169 ntBASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AL513174.1-201ENST00000423182 629 ntBASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 MTCO1P43-201ENST00000431831 488 ntBASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AL050321.1-201ENST00000432363 400 ntBASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 FABP5P3-201ENST00000437960 408 ntBASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 PDSS1P2-201ENST00000449397 678 ntBASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 Z99714.1-201ENST00000450463 807 ntBASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 SYPL1P1-201ENST00000473622 768 ntBASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 RPS4XP13-201ENST00000483219 789 ntBASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 HMGB3P15-201ENST00000507326 574 ntBASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 RNU6-1231P-201ENST00000517185 103 ntBASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC107954.1-201ENST00000565906 727 ntBASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 BNIP3P33-201ENST00000598912 569 ntBASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC079880.2-201ENST00000603790 1213 ntBASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 MIR486-1-201ENST00000612171 68 ntBASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC069209.1-201ENST00000619282 651 ntBASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AL732618.1-201ENST00000623251 301 ntBASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AP001148.1-201ENST00000624124 2359 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 RPL31P2-201ENST00000413849 377 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 FAR1P1-201ENST00000427163 934 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 YME1L1P1-201ENST00000429435 297 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 ARF4P2-201ENST00000430209 526 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 VDAC1P3-201ENST00000434069 851 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC073063.1-201ENST00000434352 607 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AL662791.1-201ENST00000441992 928 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AL358232.1-201ENST00000448030 501 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 NF1P3-201ENST00000457709 450 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 RNF138P1-201ENST00000502765 546 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC006499.5-201ENST00000505037 514 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 BTF3L4P4-201ENST00000506381 449 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 HMGN1P15-201ENST00000513870 295 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 RN7SKP13-201ENST00000515933 244 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 SNORA70.18-201ENST00000516696 98 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 PDCL2P2-201ENST00000533651 189 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC074050.1-201ENST00000563247 211 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 MIR3186-201ENST00000577404 85 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC053481.3-201ENST00000577881 843 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 MIR3690-201ENST00000580266 75 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC006116.10-201ENST00000591836 581 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC020914.6-201ENST00000594327 272 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC006077.1-201ENST00000604746 343 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC012467.1-201ENST00000607740 256 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AL118508.4-201ENST00000624142 1176 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 AC068620.4-201ENST00000636730 1182 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 U6.98-201ENST00000637157 84 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 NCAPGP1-201ENST00000505112 1814 ntBASIC3.34□□□□□ -1.87
TRBV11-1A0A0K0K1C0 ZNF37BP-203ENST00000452306 1352 ntBASIC3.34□□□□□ -1.88
TRBV11-1A0A0K0K1C0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.34□□□□□ -1.88
TRBV11-1A0A0K0K1C0 PRO1804-201ENST00000623780 2050 ntBASIC3.34□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.34□□□□□ -1.88
TRBV11-1A0A0K0K1C0 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
TRBV11-1A0A0K0K1C0 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms