Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 WBP11P1-201ENST00000562560 1931 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 RPL24P4-201ENST00000326586 421 ntBASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 Y_RNA.488-201ENST00000384403 102 ntBASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 Y_RNA.580-201ENST00000391004 95 ntBASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 CYCSP17-201ENST00000407870 315 ntBASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 MTND3P9-201ENST00000429526 346 ntBASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 CEACAMP9-201ENST00000442990 513 ntBASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 FPGT-203ENST00000467578 601 ntTSL 2 BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 AC083806.1-201ENST00000468934 316 ntBASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 RN7SL518P-201ENST00000491887 280 ntBASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 RPS4XP20-201ENST00000505751 772 ntBASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 CDH12P4-201ENST00000517835 295 ntBASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 CDH12P3-201ENST00000517935 295 ntBASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 CDH12P1-201ENST00000518435 295 ntBASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 AC087752.2-201ENST00000521219 281 ntBASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 AC104576.1-201ENST00000524225 88 ntBASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 AL109628.1-201ENST00000556877 366 ntBASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 RN7SL270P-201ENST00000579643 281 ntBASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 AL512624.1-201ENST00000613638 469 ntBASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 AC012629.3-201ENST00000623397 328 ntBASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 AC073488.9-201ENST00000631601 754 ntBASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 AC073488.6-201ENST00000632293 754 ntBASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 MAPK10-357ENST00000641831 2858 ntBASIC6.79□□□□□ -1.32
VPS9D1Q9Y2B5 AC093278.2-201ENST00000564956 2485 ntBASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 MAPK10-383ENST00000642032 3390 ntBASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 Y_RNA.143-201ENST00000363520 106 ntBASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 SNORD116-18-201ENST00000383961 92 ntBASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 Y_RNA.441-201ENST00000384123 112 ntBASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 AL033519.2-201ENST00000403958 392 ntBASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 Y_RNA.602-201ENST00000410535 92 ntBASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 AC091180.1-201ENST00000462104 372 ntBASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 RN7SL149P-201ENST00000465197 281 ntBASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 RN7SL456P-201ENST00000469290 295 ntBASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 PDCD5P2-201ENST00000507570 312 ntBASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 RPL7L1P7-201ENST00000509986 724 ntBASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 AC074250.1-201ENST00000511117 192 ntBASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 RN7SKP96-201ENST00000516948 297 ntBASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 FAM30C-201ENST00000561158 410 ntBASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 RN7SL689P-201ENST00000577215 297 ntBASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms