Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 AC092451.1-201ENST00000480211 153 ntBASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 Y_RNA.682-201ENST00000516457 100 ntBASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 Y_RNA.700-201ENST00000516806 100 ntBASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 AC136777.2-201ENST00000522979 358 ntBASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 AC013828.2-201ENST00000532487 235 ntBASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 TXNP4-201ENST00000575018 310 ntBASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 AL451049.1-201ENST00000608672 497 ntBASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 AC006157.1-201ENST00000611750 366 ntBASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 AC005592.1-201ENST00000566527 1640 ntBASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 AL731566.1-201ENST00000620490 1937 ntBASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 LINC02019-201ENST00000608605 2060 ntBASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 DBF4P1-201ENST00000412976 1892 ntBASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 AC010132.2-201ENST00000295493 1043 ntBASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 RNU6-1040P-201ENST00000383974 107 ntBASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 Y_RNA.506-201ENST00000384494 102 ntBASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 MIR223-201ENST00000385204 110 ntBASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 SOD2P1-201ENST00000396543 562 ntBASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 AL161909.1-201ENST00000397390 712 ntBASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 AC009804.1-201ENST00000400949 179 ntBASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 RNU4-6P-201ENST00000410804 122 ntBASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 MTCO3P29-201ENST00000432119 779 ntBASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 AC105402.2-201ENST00000438503 358 ntBASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 RPL17P49-201ENST00000443728 411 ntBASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 OR7E116P-201ENST00000448529 957 ntBASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 OR1H1P-201ENST00000448731 937 ntBASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 PSAT1P4-201ENST00000466500 526 ntBASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 CREM-226ENST00000469949 721 ntTSL 3 BASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 AC079080.1-201ENST00000479841 822 ntBASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 AP003385.6-201ENST00000531603 374 ntBASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 MIR5690-201ENST00000583739 73 ntBASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 MIR8080-201ENST00000622224 89 ntBASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 AC011978.2-201ENST00000569835 2054 ntBASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 AC025470.1-201ENST00000510053 2032 ntBASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PDZRN3Q9UPQ7 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 Y_RNA.252-201ENST00000364556 101 ntBASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 AL645927.1-201ENST00000396783 406 ntBASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 METTL15P3-201ENST00000415522 1221 ntBASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 EEF1A1P29-201ENST00000416082 1096 ntBASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 CRIP1P1-201ENST00000427567 185 ntBASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 EIF1P2-201ENST00000428233 350 ntBASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 HMGB3P10-201ENST00000434734 572 ntBASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 AC100832.1-201ENST00000471945 383 ntBASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 AC093270.2-201ENST00000486157 792 ntBASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 FAM206BP-201ENST00000510179 541 ntBASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 RNA5SP92-201ENST00000516437 110 ntBASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 MRPS16P1-201ENST00000523462 412 ntBASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms