Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RPL9P9-202ENST00000466501 579 ntBASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 AC021205.1-201ENST00000468797 348 ntBASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 RN7SL170P-201ENST00000487098 295 ntBASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 RN7SL101P-201ENST00000496350 279 ntBASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 RNU6-1338P-201ENST00000516328 91 ntBASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 AC026371.1-201ENST00000551867 419 ntBASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 AC109446.1-201ENST00000566172 220 ntBASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 RNU4ATAC-201ENST00000580972 127 ntBASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 AC104465.1-201ENST00000611365 139 ntBASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 U2.17-201ENST00000611454 95 ntBASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 AP000843.1-201ENST00000624880 701 ntBASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM35Q9UPQ4 AOX3P-204ENST00000491025 2107 ntBASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 RNU6-1020P-201ENST00000363684 107 ntBASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 Y_RNA.576-201ENST00000384781 102 ntBASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 AL445189.1-201ENST00000405722 338 ntBASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 RNU6-130P-201ENST00000411112 103 ntBASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 RPLP0P7-201ENST00000416050 667 ntBASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 RHOT1P3-201ENST00000436571 331 ntBASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 GAPDHP48-201ENST00000436626 961 ntBASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 AC016724.1-201ENST00000453215 421 ntBASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 PPIAP7-201ENST00000454070 489 ntBASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 RN7SL254P-201ENST00000460609 284 ntBASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 RN7SL649P-201ENST00000496974 275 ntBASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 AC023818.1-201ENST00000498379 384 ntBASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 AC104806.1-201ENST00000508720 308 ntBASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 RNU2-10P-201ENST00000516375 211 ntBASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 IGKV2D-10-201ENST00000520194 281 ntBASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 AP000620.1-201ENST00000527147 504 ntBASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 MYL2-203ENST00000548438 664 ntTSL 3 BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 AC068768.2-201ENST00000602352 343 ntBASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 AC245517.5-201ENST00000611529 162 ntBASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 AC027575.3-201ENST00000583058 2747 ntBASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC8.12□□□□□ -1.11
TRIM35Q9UPQ4 AC096921.2-201ENST00000561507 1916 ntBASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 AL117339.4-201ENST00000608335 7063 ntBASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 AC022325.1-201ENST00000502748 2199 ntBASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 snoU2_19.2-201ENST00000363024 80 ntBASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 AL080315.1-201ENST00000406055 466 ntBASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 AMMECR1LP1-201ENST00000415152 841 ntBASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 TRAPPC2P10-201ENST00000415662 323 ntBASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 TRAPPC2P5-201ENST00000426293 308 ntBASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 RPEP5-201ENST00000441137 268 ntBASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 CEACAMP6-201ENST00000452007 574 ntBASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 AC094085.1-201ENST00000468914 584 ntBASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 RPL7P23-201ENST00000493874 747 ntBASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 RN7SKP283-201ENST00000517197 270 ntBASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 AC106782.4-201ENST00000568264 210 ntBASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 AL499605.1-201ENST00000604628 403 ntBASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 AC008555.7-201ENST00000605008 583 ntBASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 MIR7109-201ENST00000613748 65 ntBASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 AL137067.2-201ENST00000621202 131 ntBASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 AC093311.1-201ENST00000506586 2021 ntBASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM35Q9UPQ4 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms