Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC7□□□□□ -1.29
SHROOM4Q9ULL8 RNA5SP306-201ENST00000411087 107 ntBASIC7□□□□□ -1.29
SHROOM4Q9ULL8 AC096533.1-201ENST00000411645 353 ntBASIC7□□□□□ -1.29
SHROOM4Q9ULL8 PRELID3BP11-201ENST00000414230 479 ntBASIC7□□□□□ -1.29
SHROOM4Q9ULL8 AC073136.2-201ENST00000417282 849 ntBASIC7□□□□□ -1.29
SHROOM4Q9ULL8 AL009174.1-201ENST00000426577 416 ntBASIC7□□□□□ -1.29
SHROOM4Q9ULL8 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC7□□□□□ -1.29
SHROOM4Q9ULL8 AC073063.1-201ENST00000434352 607 ntBASIC7□□□□□ -1.29
SHROOM4Q9ULL8 KCTD9P3-201ENST00000434597 1169 ntBASIC7□□□□□ -1.29
SHROOM4Q9ULL8 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC7□□□□□ -1.29
SHROOM4Q9ULL8 RPS26P30-201ENST00000443431 335 ntBASIC7□□□□□ -1.29
SHROOM4Q9ULL8 PRELID3BP6-201ENST00000503839 571 ntBASIC7□□□□□ -1.29
SHROOM4Q9ULL8 SUMO2P5-201ENST00000506790 245 ntBASIC7□□□□□ -1.29
SHROOM4Q9ULL8 AC005351.1-201ENST00000511152 786 ntBASIC7□□□□□ -1.29
SHROOM4Q9ULL8 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC7□□□□□ -1.29
SHROOM4Q9ULL8 AC074029.1-201ENST00000552531 1044 ntBASIC7□□□□□ -1.29
SHROOM4Q9ULL8 AL139022.2-201ENST00000606934 443 ntBASIC7□□□□□ -1.29
SHROOM4Q9ULL8 MIR7112-201ENST00000616126 65 ntBASIC7□□□□□ -1.29
SHROOM4Q9ULL8 AC000123.2-201ENST00000623124 461 ntBASIC7□□□□□ -1.29
SHROOM4Q9ULL8 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
SHROOM4Q9ULL8 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
SHROOM4Q9ULL8 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
SHROOM4Q9ULL8 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC7□□□□□ -1.29
SHROOM4Q9ULL8 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
SHROOM4Q9ULL8 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SHROOM4Q9ULL8 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
SHROOM4Q9ULL8 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SHROOM4Q9ULL8 U3.19-201ENST00000390893 196 ntBASIC6.99□□□□□ -1.29
SHROOM4Q9ULL8 RN7SKP284-201ENST00000411002 343 ntBASIC6.99□□□□□ -1.29
SHROOM4Q9ULL8 LIPT1P1-201ENST00000415870 1186 ntBASIC6.99□□□□□ -1.29
SHROOM4Q9ULL8 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC6.99□□□□□ -1.29
SHROOM4Q9ULL8 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC6.99□□□□□ -1.29
SHROOM4Q9ULL8 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC6.99□□□□□ -1.29
SHROOM4Q9ULL8 AC020893.1-201ENST00000502452 580 ntBASIC6.99□□□□□ -1.29
SHROOM4Q9ULL8 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC6.99□□□□□ -1.29
SHROOM4Q9ULL8 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.99□□□□□ -1.29
SHROOM4Q9ULL8 AC010376.1-201ENST00000522101 334 ntBASIC6.99□□□□□ -1.29
SHROOM4Q9ULL8 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.99□□□□□ -1.29
SHROOM4Q9ULL8 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC6.99□□□□□ -1.29
SHROOM4Q9ULL8 BPTFP1-201ENST00000579209 492 ntBASIC6.99□□□□□ -1.29
SHROOM4Q9ULL8 AC068790.5-201ENST00000602741 355 ntBASIC6.99□□□□□ -1.29
SHROOM4Q9ULL8 AL158050.2-201ENST00000605336 568 ntBASIC6.99□□□□□ -1.29
SHROOM4Q9ULL8 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC6.99□□□□□ -1.29
SHROOM4Q9ULL8 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SHROOM4Q9ULL8 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC6.99□□□□□ -1.29
SHROOM4Q9ULL8 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC6.99□□□□□ -1.29
SHROOM4Q9ULL8 UBE3AP2-201ENST00000429033 2259 ntBASIC6.99□□□□□ -1.29
SHROOM4Q9ULL8 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 OR10J6P-201ENST00000289731 930 ntBASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 RPS6P14-201ENST00000425165 719 ntBASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 RNU7-140P-201ENST00000459546 60 ntBASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 AC126121.1-201ENST00000482313 553 ntBASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 AC026414.1-201ENST00000504046 698 ntBASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 STMN1P2-201ENST00000508435 439 ntBASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 AP000553.6-201ENST00000641242 118 ntBASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 AC015813.6-201ENST00000624409 5808 ntBASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 RNA5SP391-201ENST00000363456 119 ntBASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 AC092638.1-201ENST00000411966 1275 ntBASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 TAF13P2-201ENST00000416876 286 ntBASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 ANKRD30BP3-201ENST00000444850 1070 ntBASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 RPL7P31-201ENST00000450192 724 ntBASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 FCF1P6-201ENST00000456841 595 ntBASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 PHBP14-201ENST00000512887 367 ntBASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 MTATP6P9-201ENST00000515039 680 ntBASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 IGJP1-201ENST00000522682 475 ntBASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 AC112503.1-201ENST00000608436 391 ntBASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
SHROOM4Q9ULL8 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms