Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 AL121766.1-201ENST00000547436 487 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 AL352979.3-201ENST00000553515 247 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 AL390334.1-201ENST00000556395 450 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 AC012435.1-202ENST00000568772 240 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 AL031985.2-201ENST00000600955 480 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 AF131215.7-201ENST00000602443 707 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 AL022161.1-201ENST00000604390 213 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 HSPE1P14-201ENST00000605812 302 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 MIR6867-201ENST00000610636 67 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL20A1Q9P218 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL20A1Q9P218 RNU6-156P-201ENST00000621869 107 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 AC231657.1-201ENST00000624313 397 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 PCMTD1P7-201ENST00000634506 357 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL20A1Q9P218 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL20A1Q9P218 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 AC090971.4-201ENST00000560291 1800 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL20A1Q9P218 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
COL20A1Q9P218 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL20A1Q9P218 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL20A1Q9P218 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.87□□□□□ -1.63
COL20A1Q9P218 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
COL20A1Q9P218 AC117529.2-201ENST00000512159 2068 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.87□□□□□ -1.63
COL20A1Q9P218 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL20A1Q9P218 RNU6-500P-201ENST00000362349 107 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 Y_RNA.77-201ENST00000362962 107 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 RNU6-984P-201ENST00000363236 109 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 RNU1-20P-201ENST00000363314 162 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 SNORA37-201ENST00000384504 129 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 RPL23AP29-201ENST00000397284 453 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 CYCSP45-201ENST00000402289 315 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 ZNF603P-201ENST00000405613 487 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 MIR1911-201ENST00000410783 80 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 RNU6-920P-201ENST00000410926 92 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 RN7SKP33-201ENST00000410942 340 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.87□□□□□ -1.63
COL20A1Q9P218 RPL23AP39-201ENST00000415533 405 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 AL356095.1-201ENST00000417217 199 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.87□□□□□ -1.63
COL20A1Q9P218 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.87□□□□□ -1.63
COL20A1Q9P218 AC073335.1-201ENST00000427776 363 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 RPL36P19-201ENST00000430744 301 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 COX6B1P7-201ENST00000430845 235 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.87□□□□□ -1.63
COL20A1Q9P218 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.87□□□□□ -1.63
COL20A1Q9P218 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.87□□□□□ -1.63
COL20A1Q9P218 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.87□□□□□ -1.63
COL20A1Q9P218 VN1R32P-201ENST00000452234 905 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 AC073387.1-201ENST00000453261 709 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.87□□□□□ -1.63
COL20A1Q9P218 AL591473.1-201ENST00000464297 313 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 AC092757.1-201ENST00000467293 467 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.87□□□□□ -1.63
COL20A1Q9P218 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
COL20A1Q9P218 AC005726.1-201ENST00000494679 427 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 RPS6P4-201ENST00000494693 758 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.87□□□□□ -1.63
COL20A1Q9P218 AC026412.2-201ENST00000512270 1075 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 RNA5SP73-201ENST00000516744 108 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 AC022790.1-201ENST00000522872 204 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.87□□□□□ -1.63
COL20A1Q9P218 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.87□□□□□ -1.63
COL20A1Q9P218 AL389895.1-201ENST00000554127 252 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 MTCYBP28-201ENST00000566728 1132 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.87□□□□□ -1.63
COL20A1Q9P218 AC233702.9-201ENST00000581528 203 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 AC083899.3-201ENST00000603413 594 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 AL109618.2-201ENST00000605527 211 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 RNU6-88P-201ENST00000606801 100 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 AC243773.3-201ENST00000613270 256 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.87□□□□□ -1.63
COL20A1Q9P218 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
COL20A1Q9P218 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 AC099063.3-201ENST00000642066 185 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
COL20A1Q9P218 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.87□□□□□ -1.63
COL20A1Q9P218 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
COL20A1Q9P218 AC011978.2-201ENST00000569835 2054 ntBASIC4.87□□□□□ -1.63
COL20A1Q9P218 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
COL20A1Q9P218 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.86□□□□□ -1.63
COL20A1Q9P218 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL20A1Q9P218 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
COL20A1Q9P218 RNU1-44P-201ENST00000384453 163 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 234.1 ms