Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC067852.4-201ENST00000590314 478 ntBASIC4.9□□□□□ -1.63
CCM2LQ9NUG4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.9□□□□□ -1.63
CCM2LQ9NUG4 AL022154.1-201ENST00000604698 785 ntBASIC4.9□□□□□ -1.63
CCM2LQ9NUG4 AC090578.1-201ENST00000604955 591 ntBASIC4.9□□□□□ -1.63
CCM2LQ9NUG4 AC133644.2-201ENST00000608142 540 ntBASIC4.9□□□□□ -1.63
CCM2LQ9NUG4 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.9□□□□□ -1.63
CCM2LQ9NUG4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CCM2LQ9NUG4 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.9□□□□□ -1.63
CCM2LQ9NUG4 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCM2LQ9NUG4 AC132068.1-201ENST00000623805 459 ntBASIC4.9□□□□□ -1.63
CCM2LQ9NUG4 AL160394.1-201ENST00000624765 724 ntBASIC4.9□□□□□ -1.63
CCM2LQ9NUG4 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.9□□□□□ -1.63
CCM2LQ9NUG4 AC099654.13-201ENST00000639774 207 ntBASIC4.9□□□□□ -1.63
CCM2LQ9NUG4 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCM2LQ9NUG4 MTND5P26-201ENST00000426018 1752 ntBASIC4.9□□□□□ -1.63
CCM2LQ9NUG4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CCM2LQ9NUG4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.9□□□□□ -1.63
CCM2LQ9NUG4 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCM2LQ9NUG4 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCM2LQ9NUG4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCM2LQ9NUG4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AC126323.6-202ENST00000568092 3511 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AL356421.1-201ENST00000403255 413 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 RNA5SP487-201ENST00000410186 122 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 C1DP2-201ENST00000418167 426 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AC004690.1-201ENST00000418216 328 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AL161722.2-201ENST00000434731 981 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 RPL7P11-201ENST00000437586 658 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AC006466.1-201ENST00000438721 289 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AC127537.2-201ENST00000439258 465 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 DNAJC19P4-201ENST00000440115 345 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 FAM103A2P-201ENST00000444122 354 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 IFNWP4-201ENST00000453148 294 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AC126182.1-201ENST00000478134 357 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AC013356.1-201ENST00000489027 564 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AC105252.1-201ENST00000503089 286 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 GTF2F2P1-201ENST00000511083 675 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 RNU6-714P-201ENST00000516963 103 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AC087883.1-201ENST00000551882 391 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AC087481.2-201ENST00000565492 330 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 OR1F2P-201ENST00000570470 933 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 RNF138P2-201ENST00000603490 592 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AC008814.1-201ENST00000603797 406 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 RBM11P1-201ENST00000604951 799 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AC098614.4-201ENST00000607601 462 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AC072046.2-201ENST00000618366 268 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AL731566.2-201ENST00000618971 317 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 AL596245.1-201ENST00000618994 362 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 MIR6810-201ENST00000622701 70 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 ZNF33CP-201ENST00000432492 2030 ntBASIC4.89□□□□□ -1.63
CCM2LQ9NUG4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 MAPK10-304ENST00000641341 3984 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 MIR1250-201ENST00000408098 113 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 SPA17P1-201ENST00000416656 452 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 CYCSP10-201ENST00000417973 294 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 SRSF1P1-201ENST00000424058 520 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 GSTM5P1-201ENST00000434751 660 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 OR52B5P-201ENST00000435337 951 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 RABEPKP1-201ENST00000440529 1026 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 MTND6P13-201ENST00000443510 523 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 GAPDHP25-201ENST00000447061 1001 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 RPL7P52-201ENST00000449200 742 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms