Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 AC007993.1-201ENST00000621298 2430 ntBASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 OLMALINC-203ENST00000641087 3779 ntBASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 Y_RNA.262-201ENST00000364641 102 ntBASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 Y_RNA.369-201ENST00000365568 117 ntBASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 Y_RNA.480-201ENST00000384364 102 ntBASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 Y_RNA.571-201ENST00000384753 98 ntBASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 AL357139.1-201ENST00000407792 426 ntBASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 RPL30P13-201ENST00000418873 348 ntBASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 AC069213.2-201ENST00000420238 366 ntBASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 AC024067.1-201ENST00000426199 223 ntBASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 RPL3P11-201ENST00000434028 1146 ntBASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 SNORD121B-201ENST00000458838 81 ntBASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 ERHP1-201ENST00000523006 310 ntBASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 RN7SL261P-201ENST00000613441 282 ntBASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 uc_338.29-201ENST00000615099 168 ntBASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 SNHG22-203ENST00000617833 660 ntBASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC10.58□□□□□ -0.72
SCAF1Q9H7N4 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 LRRC37A12P-201ENST00000454917 1801 ntBASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 ODF3-202ENST00000342593 386 ntTSL 5 BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 SNORD73B-201ENST00000364394 72 ntBASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 RNU6-514P-201ENST00000384208 107 ntBASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 HNRNPA1P18-201ENST00000433537 927 ntBASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 AL451074.4-201ENST00000447545 470 ntBASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 AL596266.1-201ENST00000448132 400 ntBASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 RPS11P1-201ENST00000451072 473 ntBASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 AL133351.3-201ENST00000454998 193 ntBASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 SNORD2.1-201ENST00000458762 69 ntBASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 AC233724.10-201ENST00000510454 409 ntBASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 AC016065.2-201ENST00000514530 444 ntBASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 RNU6-659P-201ENST00000516454 104 ntBASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 TRAV32-201ENST00000553993 340 ntBASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 AC006077.1-201ENST00000604746 343 ntBASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SCAF1Q9H7N4 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SCAF1Q9H7N4 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC10.56□□□□□ -0.72
SCAF1Q9H7N4 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SCAF1Q9H7N4 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SCAF1Q9H7N4 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
SCAF1Q9H7N4 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
SCAF1Q9H7N4 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
SCAF1Q9H7N4 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC10.56□□□□□ -0.72
SCAF1Q9H7N4 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
SCAF1Q9H7N4 AL445437.1-201ENST00000623157 3087 ntBASIC10.56□□□□□ -0.72
SCAF1Q9H7N4 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC10.56□□□□□ -0.72
SCAF1Q9H7N4 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SCAF1Q9H7N4 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC10.56□□□□□ -0.72
SCAF1Q9H7N4 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC10.56□□□□□ -0.72
SCAF1Q9H7N4 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC10.56□□□□□ -0.72
SCAF1Q9H7N4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SCAF1Q9H7N4 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC10.56□□□□□ -0.72
SCAF1Q9H7N4 AC006058.1-201ENST00000568686 5067 ntBASIC10.56□□□□□ -0.72
SCAF1Q9H7N4 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC10.56□□□□□ -0.72
SCAF1Q9H7N4 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC10.56□□□□□ -0.72
SCAF1Q9H7N4 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms