Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 AC009901.1-201ENST00000506703 541 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 AC126177.5-201ENST00000549599 178 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 AL049779.3-201ENST00000557141 606 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 AL161616.1-201ENST00000611867 286 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 AL138726.1-201ENST00000614873 333 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 MIR7703-201ENST00000620784 77 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 AC091925.2-201ENST00000625059 256 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
COL25A1Q9BXS0 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
COL25A1Q9BXS0 MFSD8-216ENST00000641147 4009 ntBASIC6.09□□□□□ -1.44
COL25A1Q9BXS0 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 AC130304.1-201ENST00000622942 2385 ntBASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 Y_RNA.64-201ENST00000362845 102 ntBASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 RNU6-82P-201ENST00000363970 107 ntBASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 SNORD27-201ENST00000363981 72 ntBASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 SNORA62.1-201ENST00000364287 154 ntBASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 RNA5SP87-201ENST00000384155 118 ntBASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 RNU6-48P-201ENST00000384161 107 ntBASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 RNU6-39P-201ENST00000384344 107 ntBASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 AL133173.1-201ENST00000423458 397 ntBASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 AC236972.1-201ENST00000433225 199 ntBASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 AC002381.1-201ENST00000447049 280 ntBASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 AL138752.1-201ENST00000452964 351 ntBASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 AC128657.1-201ENST00000549459 145 ntBASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 FAM106CP-201ENST00000582212 507 ntBASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 AL590392.1-201ENST00000604960 446 ntBASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 HMGB1P50-201ENST00000605814 607 ntBASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL25A1Q9BXS0 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 AC093278.2-201ENST00000564956 2485 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 OR9K1P-202ENST00000641111 3217 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 HSPE1P11-201ENST00000339579 310 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 RN7SKP104-201ENST00000362605 328 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 RNU6-666P-201ENST00000363499 107 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 RNY1-201ENST00000364228 113 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 RNU6-806P-201ENST00000365147 105 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 RNU6-190P-201ENST00000384154 102 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 DHFRP6-201ENST00000401776 268 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms