Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RN7SKP298-201ENST00000515950 94 ntBASIC4.44□□□□□ -1.7
SNX18Q96RF0 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.44□□□□□ -1.7
SNX18Q96RF0 AP002748.2-201ENST00000528671 348 ntBASIC4.44□□□□□ -1.7
SNX18Q96RF0 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.44□□□□□ -1.7
SNX18Q96RF0 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX18Q96RF0 CCNG2P1-201ENST00000549521 1000 ntBASIC4.44□□□□□ -1.7
SNX18Q96RF0 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.44□□□□□ -1.7
SNX18Q96RF0 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.44□□□□□ -1.7
SNX18Q96RF0 AC234778.2-201ENST00000566241 354 ntBASIC4.44□□□□□ -1.7
SNX18Q96RF0 AC091489.2-201ENST00000566263 604 ntBASIC4.44□□□□□ -1.7
SNX18Q96RF0 OR1F2P-201ENST00000570470 933 ntBASIC4.44□□□□□ -1.7
SNX18Q96RF0 AC141257.3-201ENST00000572906 215 ntBASIC4.44□□□□□ -1.7
SNX18Q96RF0 CYCSP40-201ENST00000575927 294 ntBASIC4.44□□□□□ -1.7
SNX18Q96RF0 NF1P5-201ENST00000588287 448 ntBASIC4.44□□□□□ -1.7
SNX18Q96RF0 AC093765.1-201ENST00000603758 881 ntBASIC4.44□□□□□ -1.7
SNX18Q96RF0 AP002360.4-201ENST00000606980 481 ntBASIC4.44□□□□□ -1.7
SNX18Q96RF0 AC133644.2-201ENST00000608142 540 ntBASIC4.44□□□□□ -1.7
SNX18Q96RF0 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.44□□□□□ -1.7
SNX18Q96RF0 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX18Q96RF0 AC123768.4-201ENST00000616244 701 ntBASIC4.44□□□□□ -1.7
SNX18Q96RF0 AC073534.2-201ENST00000620377 381 ntBASIC4.44□□□□□ -1.7
SNX18Q96RF0 AC087190.4-201ENST00000574616 8334 ntBASIC4.44□□□□□ -1.7
SNX18Q96RF0 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.44□□□□□ -1.7
SNX18Q96RF0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SNX18Q96RF0 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX18Q96RF0 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SNX18Q96RF0 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SNX18Q96RF0 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
SNX18Q96RF0 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SNX18Q96RF0 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNX18Q96RF0 AC018529.3-201ENST00000624212 2254 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SNX18Q96RF0 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 RNU6-259P-201ENST00000383999 107 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 RNU6-921P-201ENST00000384361 107 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 RNU6-441P-201ENST00000384545 106 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 MIR548F1-201ENST00000408667 84 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 OFD1P18Y-201ENST00000420889 959 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 RPS27AP14-201ENST00000422868 454 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 PSMD10P3-201ENST00000437000 448 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 NANOGNBP1-201ENST00000448444 480 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 RPL7P31-201ENST00000450192 724 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 AC091685.2-201ENST00000454924 864 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 MEMO1P3-201ENST00000459811 302 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SNX18Q96RF0 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 AC010350.1-201ENST00000504908 231 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 COX6B1P5-201ENST00000509843 249 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNX18Q96RF0 VWA8P1-201ENST00000510889 176 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 AF131216.2-201ENST00000512316 564 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 AC006499.2-201ENST00000513470 337 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 MTND5P4-201ENST00000514978 288 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 RNA5SP392-201ENST00000516905 112 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 RN7SKP147-201ENST00000517154 244 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 PDCD5P1-201ENST00000543528 309 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 AC069240.1-201ENST00000548774 375 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 TVP23CP2-201ENST00000571473 623 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SNX18Q96RF0 BNIP3P11-201ENST00000603878 563 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 AC098614.4-201ENST00000607601 462 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 AL049539.1-201ENST00000611964 459 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 AL355073.2-201ENST00000612106 557 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 AC100827.5-201ENST00000615883 426 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 AP001784.1-201ENST00000624107 428 ntBASIC4.43□□□□□ -1.7
SNX18Q96RF0 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.43□□□□□ -1.7
SNX18Q96RF0 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNX18Q96RF0 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNX18Q96RF0 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNX18Q96RF0 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNX18Q96RF0 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNX18Q96RF0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 AL359922.3-201ENST00000624779 1670 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms