Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CCDC7Q96M83 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC7Q96M83 AL033523.1-201ENST00000605153 153 ntBASIC4.45□□□□□ -1.7
CCDC7Q96M83 KATNBL1P1-201ENST00000605192 748 ntBASIC4.45□□□□□ -1.7
CCDC7Q96M83 AP001005.3-201ENST00000622049 129 ntBASIC4.45□□□□□ -1.7
CCDC7Q96M83 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
CCDC7Q96M83 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC7Q96M83 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC7Q96M83 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC7Q96M83 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC7Q96M83 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CCDC7Q96M83 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC7Q96M83 RNU6-31P-201ENST00000384388 108 ntBASIC4.44□□□□□ -1.7
CCDC7Q96M83 SNORA44-201ENST00000384584 132 ntBASIC4.44□□□□□ -1.7
CCDC7Q96M83 MTND3P20-201ENST00000407663 186 ntBASIC4.44□□□□□ -1.7
CCDC7Q96M83 RNA5SP293-201ENST00000410527 113 ntBASIC4.44□□□□□ -1.7
CCDC7Q96M83 AC093698.1-201ENST00000423843 571 ntBASIC4.44□□□□□ -1.7
CCDC7Q96M83 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC7Q96M83 AC107083.1-201ENST00000439643 279 ntBASIC4.44□□□□□ -1.7
CCDC7Q96M83 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC7Q96M83 AC108157.1-201ENST00000510511 539 ntBASIC4.44□□□□□ -1.7
CCDC7Q96M83 RNU6-362P-201ENST00000516736 90 ntBASIC4.44□□□□□ -1.7
CCDC7Q96M83 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC7Q96M83 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC7Q96M83 MIR4672-201ENST00000583126 81 ntBASIC4.44□□□□□ -1.7
CCDC7Q96M83 ELL2P4-201ENST00000446870 1376 ntBASIC4.44□□□□□ -1.7
CCDC7Q96M83 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC7Q96M83 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CCDC7Q96M83 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC7Q96M83 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC7Q96M83 RN7SKP222-201ENST00000410651 315 ntBASIC4.43□□□□□ -1.7
CCDC7Q96M83 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC7Q96M83 AC006960.1-201ENST00000419980 153 ntBASIC4.43□□□□□ -1.7
CCDC7Q96M83 IPMKP1-201ENST00000425988 855 ntBASIC4.43□□□□□ -1.7
CCDC7Q96M83 RPS12P18-201ENST00000442381 270 ntBASIC4.43□□□□□ -1.7
CCDC7Q96M83 FTH1P25-201ENST00000447665 469 ntBASIC4.43□□□□□ -1.7
CCDC7Q96M83 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC7Q96M83 AC010468.1-201ENST00000461022 817 ntBASIC4.43□□□□□ -1.7
CCDC7Q96M83 RPS4XP22-201ENST00000480755 780 ntBASIC4.43□□□□□ -1.7
CCDC7Q96M83 AC106872.2-201ENST00000494303 480 ntBASIC4.43□□□□□ -1.7
CCDC7Q96M83 SNORA64.4-201ENST00000516632 81 ntBASIC4.43□□□□□ -1.7
CCDC7Q96M83 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.43□□□□□ -1.7
CCDC7Q96M83 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC7Q96M83 CR383656.14-201ENST00000551951 406 ntBASIC4.43□□□□□ -1.7
CCDC7Q96M83 AL121603.1-201ENST00000553815 142 ntBASIC4.43□□□□□ -1.7
CCDC7Q96M83 AP000919.1-202ENST00000581139 1264 ntBASIC4.43□□□□□ -1.7
CCDC7Q96M83 AL137072.1-201ENST00000603444 466 ntBASIC4.43□□□□□ -1.7
CCDC7Q96M83 AC135803.1-201ENST00000608748 565 ntBASIC4.43□□□□□ -1.7
CCDC7Q96M83 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC7Q96M83 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC7Q96M83 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC7Q96M83 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC7Q96M83 AC091903.1-201ENST00000624322 454 ntBASIC4.43□□□□□ -1.7
CCDC7Q96M83 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC7Q96M83 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC7Q96M83 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC7Q96M83 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC7Q96M83 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC7Q96M83 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC7Q96M83 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC7Q96M83 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC7Q96M83 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.42□□□□□ -1.7
CCDC7Q96M83 RNU6-532P-201ENST00000384318 107 ntBASIC4.42□□□□□ -1.7
CCDC7Q96M83 AL138885.1-201ENST00000405921 675 ntBASIC4.42□□□□□ -1.7
CCDC7Q96M83 AL031121.1-201ENST00000406553 254 ntBASIC4.42□□□□□ -1.7
CCDC7Q96M83 MTCYBP12-201ENST00000440559 1134 ntBASIC4.42□□□□□ -1.7
CCDC7Q96M83 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC7Q96M83 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC7Q96M83 HMGB1P3-201ENST00000502802 616 ntBASIC4.42□□□□□ -1.7
CCDC7Q96M83 AC093770.1-201ENST00000511559 571 ntBASIC4.42□□□□□ -1.7
CCDC7Q96M83 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC7Q96M83 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC7Q96M83 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC7Q96M83 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC7Q96M83 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC7Q96M83 AP005205.1-201ENST00000563503 508 ntBASIC4.42□□□□□ -1.7
CCDC7Q96M83 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC7Q96M83 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC7Q96M83 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC7Q96M83 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC7Q96M83 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC7Q96M83 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC7Q96M83 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC7Q96M83 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC7Q96M83 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC7Q96M83 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC7Q96M83 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CCDC7Q96M83 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.42□□□□□ -1.7
CCDC7Q96M83 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC7Q96M83 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC7Q96M83 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.41□□□□□ -1.7
CCDC7Q96M83 ELOCP23-201ENST00000452014 332 ntBASIC4.41□□□□□ -1.7
CCDC7Q96M83 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC7Q96M83 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC7Q96M83 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC7Q96M83 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC7Q96M83 RNU6-1308P-201ENST00000516817 103 ntBASIC4.41□□□□□ -1.7
CCDC7Q96M83 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC7Q96M83 AC034105.3-201ENST00000565294 442 ntBASIC4.41□□□□□ -1.7
CCDC7Q96M83 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms