Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 KPNA2P2-201ENST00000419546 1489 ntBASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 RNA5SP28-201ENST00000363841 119 ntBASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 RNU6-1226P-201ENST00000384317 107 ntBASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 RNU1-44P-201ENST00000384453 163 ntBASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 MIR129-1-201ENST00000384972 72 ntBASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 AL121834.1-202ENST00000404494 277 ntBASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 HDGFP1-201ENST00000405943 252 ntBASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 AC073335.1-201ENST00000427776 363 ntBASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 NPM1P34-201ENST00000428821 893 ntBASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 AL132765.1-201ENST00000434165 553 ntBASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 MTND4P6-201ENST00000438297 472 ntBASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 MTND3P7-201ENST00000474435 343 ntBASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 KPNA2P3-201ENST00000584190 848 ntBASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 AC010738.1-201ENST00000604970 987 ntBASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 AC018714.1-201ENST00000605028 208 ntBASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 AC008083.4-201ENST00000615076 444 ntBASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 FAM157B-203ENST00000639350 358 ntBASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.34□□□□□ -1.55
CHMP4CQ96CF2 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.34□□□□□ -1.56
CHMP4CQ96CF2 AL079343.1-201ENST00000572358 1771 ntBASIC5.34□□□□□ -1.56
CHMP4CQ96CF2 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CHMP4CQ96CF2 AC011266.1-201ENST00000624119 3569 ntBASIC5.34□□□□□ -1.56
CHMP4CQ96CF2 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 MAPK10-304ENST00000641341 3984 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 AL122126.1-201ENST00000546905 1318 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 AC011477.1-204ENST00000623416 1325 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 RNA5SP502-201ENST00000362694 119 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 MTCYBP38-201ENST00000417160 1123 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 AC008065.1-201ENST00000428525 348 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 AL590103.1-201ENST00000434488 307 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 MTCYBP39-201ENST00000437562 491 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 RPL39P6-201ENST00000448289 150 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 IFNWP4-201ENST00000453148 294 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 AC072039.1-201ENST00000477611 581 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 HMGB1P21-201ENST00000502313 581 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 AC083829.1-201ENST00000503756 657 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 HSPE1P23-201ENST00000509838 286 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 AC239860.2-201ENST00000525886 270 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 MIR5096-201ENST00000583713 70 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 VN1R92P-201ENST00000598511 928 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 AC008782.1-201ENST00000603386 430 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 BNIP3P11-201ENST00000603878 563 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 ARF4P1-201ENST00000605447 541 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 MLECP1-201ENST00000615893 709 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 AC079228.1-201ENST00000624774 1049 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 MTND5P24-201ENST00000438892 1767 ntBASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHMP4CQ96CF2 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CHMP4CQ96CF2 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHMP4CQ96CF2 AL133412.1-201ENST00000380194 2992 ntBASIC5.32□□□□□ -1.56
CHMP4CQ96CF2 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHMP4CQ96CF2 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.32□□□□□ -1.56
CHMP4CQ96CF2 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CHMP4CQ96CF2 OR10J6P-201ENST00000289731 930 ntBASIC5.32□□□□□ -1.56
CHMP4CQ96CF2 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms