Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AL590139.1-201ENST00000416267 400 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.02□□□□□ -1.61
HPS3Q969F9 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HPS3Q969F9 RPS12P10-201ENST00000427031 377 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 AC008065.1-201ENST00000428525 348 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 AL831737.1-201ENST00000441288 271 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.02□□□□□ -1.61
HPS3Q969F9 AL360221.1-201ENST00000445989 335 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.02□□□□□ -1.61
HPS3Q969F9 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HPS3Q969F9 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HPS3Q969F9 KATNBL1P6-201ENST00000453433 915 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.02□□□□□ -1.61
HPS3Q969F9 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HPS3Q969F9 MEMO1P3-201ENST00000459811 302 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 FTH1P2-201ENST00000466086 412 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.02□□□□□ -1.61
HPS3Q969F9 RN7SL481P-201ENST00000477764 299 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 RPS4XP15-201ENST00000489210 795 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.02□□□□□ -1.61
HPS3Q969F9 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.02□□□□□ -1.61
HPS3Q969F9 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 AC087276.1-201ENST00000529659 480 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.02□□□□□ -1.61
HPS3Q969F9 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
HPS3Q969F9 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.02□□□□□ -1.61
HPS3Q969F9 PCMTD1P2-201ENST00000565017 355 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.02□□□□□ -1.61
HPS3Q969F9 AC136618.2-201ENST00000575091 400 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.02□□□□□ -1.61
HPS3Q969F9 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.02□□□□□ -1.61
HPS3Q969F9 MIR4697-201ENST00000582977 78 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 AC091178.1-203ENST00000584586 279 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.02□□□□□ -1.61
HPS3Q969F9 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.02□□□□□ -1.61
HPS3Q969F9 HULC.1-201ENST00000612720 240 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 AL356266.1-201ENST00000623311 483 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 AC092192.1-201ENST00000633154 1018 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HPS3Q969F9 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HPS3Q969F9 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HPS3Q969F9 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HPS3Q969F9 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
HPS3Q969F9 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.02□□□□□ -1.61
HPS3Q969F9 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HPS3Q969F9 AC010300.1-201ENST00000600671 5134 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.01□□□□□ -1.61
HPS3Q969F9 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.01□□□□□ -1.61
HPS3Q969F9 GDI2P1-201ENST00000429312 1336 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.01□□□□□ -1.61
HPS3Q969F9 AC130650.2-201ENST00000618736 2403 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HPS3Q969F9 AL672167.1-206ENST00000356293 943 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 RNU1-63P-201ENST00000383902 164 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 SNORA70F-201ENST00000384142 135 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 MIR298-201ENST00000401212 88 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 AL121972.1-201ENST00000402023 252 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 Z98745.1-201ENST00000402553 494 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.01□□□□□ -1.61
HPS3Q969F9 AC069213.2-201ENST00000420238 366 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HPS3Q969F9 RAD23BP1-201ENST00000421404 1227 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 AL138785.1-201ENST00000425821 331 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.01□□□□□ -1.61
HPS3Q969F9 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HPS3Q969F9 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.01□□□□□ -1.61
HPS3Q969F9 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.01□□□□□ -1.61
HPS3Q969F9 ARPC3P5-201ENST00000448802 534 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 AC116337.2-201ENST00000477662 156 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 AC109486.1-201ENST00000486833 374 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 AC068724.1-201ENST00000487100 792 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 AL024509.2-201ENST00000493462 493 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 AC006499.5-201ENST00000505037 514 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 AC113430.1-201ENST00000506872 718 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 PGBD4P4-201ENST00000509673 613 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 MTND5P4-201ENST00000514978 288 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 Y_RNA.695-201ENST00000516715 107 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 RAB9BP1-201ENST00000519581 626 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.01□□□□□ -1.61
HPS3Q969F9 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.01□□□□□ -1.61
HPS3Q969F9 AC068446.3-201ENST00000555285 382 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 PSMB7P1-201ENST00000556349 514 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 AL133457.1-201ENST00000564251 987 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.01□□□□□ -1.61
HPS3Q969F9 AC090312.1-201ENST00000580637 348 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 RN7SL690P-201ENST00000582087 240 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 MAGOH2P-202ENST00000584384 429 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HPS3Q969F9 AC234771.5-201ENST00000600161 514 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 AC012557.2-201ENST00000605919 418 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 AC080013.4-201ENST00000607624 649 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 AP002360.3-201ENST00000607673 710 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 AC012360.2-201ENST00000609349 391 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 AL161616.1-201ENST00000611867 286 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HPS3Q969F9 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.01□□□□□ -1.61
HPS3Q969F9 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HPS3Q969F9 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HPS3Q969F9 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.01□□□□□ -1.61
HPS3Q969F9 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms