Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.61□□□□□ -1.35
HLA-CQ95604 AC004232.1-201ENST00000571388 208 ntBASIC6.61□□□□□ -1.35
HLA-CQ95604 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.61□□□□□ -1.35
HLA-CQ95604 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC6.61□□□□□ -1.35
HLA-CQ95604 AL512643.1-201ENST00000635735 524 ntBASIC6.61□□□□□ -1.35
HLA-CQ95604 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HLA-CQ95604 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
HLA-CQ95604 AC074029.4-201ENST00000624796 1859 ntBASIC6.61□□□□□ -1.35
HLA-CQ95604 MAPK10-261ENST00000641050 3109 ntBASIC6.61□□□□□ -1.35
HLA-CQ95604 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-CQ95604 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.61□□□□□ -1.35
HLA-CQ95604 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-CQ95604 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-CQ95604 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-CQ95604 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-CQ95604 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-CQ95604 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-CQ95604 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-CQ95604 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-CQ95604 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC6.61□□□□□ -1.35
HLA-CQ95604 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC6.61□□□□□ -1.35
HLA-CQ95604 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-CQ95604 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.6□□□□□ -1.35
HLA-CQ95604 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
HLA-CQ95604 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-CQ95604 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-CQ95604 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-CQ95604 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-CQ95604 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
HLA-CQ95604 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
HLA-CQ95604 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
HLA-CQ95604 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-CQ95604 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC6.6□□□□□ -1.35
HLA-CQ95604 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.6□□□□□ -1.35
HLA-CQ95604 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
HLA-CQ95604 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-CQ95604 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-CQ95604 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-CQ95604 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
HLA-CQ95604 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-CQ95604 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-CQ95604 OR10R3P-201ENST00000361688 942 ntBASIC6.6□□□□□ -1.35
HLA-CQ95604 RNU6-214P-201ENST00000384130 107 ntBASIC6.6□□□□□ -1.35
HLA-CQ95604 Y_RNA.473-201ENST00000384333 102 ntBASIC6.6□□□□□ -1.35
HLA-CQ95604 Y_RNA.485-201ENST00000384395 102 ntBASIC6.6□□□□□ -1.35
HLA-CQ95604 RNU2-15P-201ENST00000410692 191 ntBASIC6.6□□□□□ -1.35
HLA-CQ95604 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.6□□□□□ -1.35
HLA-CQ95604 AC011933.1-201ENST00000413334 321 ntBASIC6.6□□□□□ -1.35
HLA-CQ95604 RBMY1KP-201ENST00000423480 476 ntBASIC6.6□□□□□ -1.35
HLA-CQ95604 BX323845.3-201ENST00000428215 527 ntBASIC6.6□□□□□ -1.35
HLA-CQ95604 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.6□□□□□ -1.35
HLA-CQ95604 AL359672.1-201ENST00000442302 409 ntBASIC6.6□□□□□ -1.35
HLA-CQ95604 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-CQ95604 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.6□□□□□ -1.35
HLA-CQ95604 RPS17P13-201ENST00000448974 407 ntBASIC6.6□□□□□ -1.35
HLA-CQ95604 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.6□□□□□ -1.35
HLA-CQ95604 AC092865.4-201ENST00000477936 615 ntBASIC6.6□□□□□ -1.35
HLA-CQ95604 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6.6□□□□□ -1.35
HLA-CQ95604 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-CQ95604 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.6□□□□□ -1.35
HLA-CQ95604 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.6□□□□□ -1.35
HLA-CQ95604 MIR1269B-201ENST00000580405 75 ntBASIC6.6□□□□□ -1.35
HLA-CQ95604 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
HLA-CQ95604 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-CQ95604 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-CQ95604 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-CQ95604 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
HLA-CQ95604 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
HLA-CQ95604 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
HLA-CQ95604 AC008555.1-201ENST00000561778 2757 ntBASIC6.6□□□□□ -1.35
HLA-CQ95604 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-CQ95604 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
HLA-CQ95604 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-CQ95604 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-CQ95604 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.6□□□□□ -1.35
HLA-CQ95604 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.59□□□□□ -1.35
HLA-CQ95604 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.59□□□□□ -1.35
HLA-CQ95604 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.59□□□□□ -1.35
HLA-CQ95604 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.59□□□□□ -1.35
HLA-CQ95604 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.59□□□□□ -1.35
HLA-CQ95604 RBMY1HP-201ENST00000382759 1389 ntBASIC6.59□□□□□ -1.35
HLA-CQ95604 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HLA-CQ95604 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
HLA-CQ95604 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HLA-CQ95604 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC6.59□□□□□ -1.35
HLA-CQ95604 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HLA-CQ95604 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
HLA-CQ95604 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.59□□□□□ -1.35
HLA-CQ95604 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HLA-CQ95604 AC009313.2-201ENST00000417893 1941 ntBASIC6.59□□□□□ -1.35
HLA-CQ95604 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
HLA-CQ95604 RNU1-150P-201ENST00000362491 162 ntBASIC6.59□□□□□ -1.35
HLA-CQ95604 MT-TW-201ENST00000387382 68 ntBASIC6.59□□□□□ -1.35
HLA-CQ95604 RNA5SP156-201ENST00000410250 110 ntBASIC6.59□□□□□ -1.35
HLA-CQ95604 OR2AT2P-201ENST00000413438 905 ntBASIC6.59□□□□□ -1.35
HLA-CQ95604 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.59□□□□□ -1.35
HLA-CQ95604 AL590135.1-201ENST00000422215 156 ntBASIC6.59□□□□□ -1.35
HLA-CQ95604 USP9YP30-201ENST00000430729 455 ntBASIC6.59□□□□□ -1.35
HLA-CQ95604 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC6.59□□□□□ -1.35
HLA-CQ95604 RPL21P2-201ENST00000440049 481 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms