Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC008280.1-201ENST00000418851 412 ntBASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 HMGN2P21-201ENST00000447764 270 ntBASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 AC073387.1-201ENST00000453261 709 ntBASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 MTCYBP14-201ENST00000457471 715 ntBASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 PLGLA-201ENST00000465668 449 ntBASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 AC078817.1-201ENST00000492623 435 ntBASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 AC010265.1-201ENST00000513509 211 ntBASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 MTCO1P30-201ENST00000515244 580 ntBASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 SNORA70.24-201ENST00000517233 118 ntBASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 AC005476.1-201ENST00000554427 397 ntBASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 AC017100.2-201ENST00000584628 355 ntBASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 ELOCP35-201ENST00000604289 336 ntBASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 AC096577.2-201ENST00000611455 153 ntBASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 AC084035.1-201ENST00000634543 607 ntBASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 AC073346.2-201ENST00000624724 2058 ntBASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC112Q8NEF3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 CCNB2P1-201ENST00000399411 1150 ntBASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 AC093151.1-201ENST00000427711 313 ntBASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 CYCSP4-201ENST00000429682 331 ntBASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 DDX6P1-205ENST00000441966 1436 ntBASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 HMGB3P30-201ENST00000457863 606 ntBASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 RN7SL293P-201ENST00000481765 281 ntBASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 FCF1P8-201ENST00000510322 597 ntBASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 NF1P5-201ENST00000588287 448 ntBASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 AL161756.2-201ENST00000604597 246 ntBASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 AL079305.1-201ENST00000623159 3008 ntBASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 AC243312.2-201ENST00000623340 601 ntBASIC3.57□□□□□ -1.84
CCDC112Q8NEF3 AL133383.2-201ENST00000622958 2336 ntBASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 RNA5SP50-201ENST00000363731 107 ntBASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 MIR183-201ENST00000384958 110 ntBASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 MTND4P11-201ENST00000417020 1058 ntBASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 AC092641.1-201ENST00000440229 772 ntBASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 CCRL1P1-201ENST00000449542 1053 ntBASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 AC074250.1-201ENST00000511117 192 ntBASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 EIF4EP5-201ENST00000528228 640 ntBASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 AC127502.3-201ENST00000636170 1206 ntBASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 U6.105-201ENST00000637379 88 ntBASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC112Q8NEF3 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 AC025125.1-201ENST00000624743 1922 ntBASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 RNU1-70P-201ENST00000362618 164 ntBASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 MIR491-201ENST00000384877 84 ntBASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 SNORA48.8-201ENST00000391324 134 ntBASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 HMGB1P10-201ENST00000395823 563 ntBASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 RNU2-37P-201ENST00000410695 177 ntBASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 RNA5SP344-201ENST00000411081 104 ntBASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 AC245052.5-201ENST00000416320 649 ntBASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms