Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
VPS8Q8N3P4 GTF2H2B-203ENST00000508065 1432 ntBASIC4.4□□□□□ -1.71
VPS8Q8N3P4 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS8Q8N3P4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS8Q8N3P4 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
VPS8Q8N3P4 RNU1-112P-201ENST00000364401 164 ntBASIC4.39□□□□□ -1.71
VPS8Q8N3P4 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS8Q8N3P4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC4.39□□□□□ -1.71
VPS8Q8N3P4 RAB6C-AS1-202ENST00000433431 123 ntBASIC4.39□□□□□ -1.71
VPS8Q8N3P4 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS8Q8N3P4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS8Q8N3P4 AC090115.4-201ENST00000609970 188 ntBASIC4.39□□□□□ -1.71
VPS8Q8N3P4 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS8Q8N3P4 DDX18P3-201ENST00000404856 2007 ntBASIC4.39□□□□□ -1.71
VPS8Q8N3P4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS8Q8N3P4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS8Q8N3P4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 MIR9-1-201ENST00000385198 89 ntBASIC4.38□□□□□ -1.71
VPS8Q8N3P4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 AL138827.1-201ENST00000402666 306 ntBASIC4.38□□□□□ -1.71
VPS8Q8N3P4 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 AC006111.3-201ENST00000622137 383 ntBASIC4.38□□□□□ -1.71
VPS8Q8N3P4 BMS1P21-201ENST00000634565 365 ntBASIC4.38□□□□□ -1.71
VPS8Q8N3P4 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 AC092593.1-201ENST00000515413 1815 ntBASIC4.38□□□□□ -1.71
VPS8Q8N3P4 AL512430.2-201ENST00000406786 339 ntBASIC4.38□□□□□ -1.71
VPS8Q8N3P4 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 MTND6P18-201ENST00000439477 513 ntBASIC4.38□□□□□ -1.71
VPS8Q8N3P4 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 AC005002.1-201ENST00000447458 540 ntBASIC4.38□□□□□ -1.71
VPS8Q8N3P4 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 AC026801.2-201ENST00000515352 425 ntBASIC4.38□□□□□ -1.71
VPS8Q8N3P4 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 FAM60DP-201ENST00000524174 632 ntBASIC4.38□□□□□ -1.71
VPS8Q8N3P4 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.38□□□□□ -1.71
VPS8Q8N3P4 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS8Q8N3P4 AC122134.1-201ENST00000565664 1104 ntBASIC4.38□□□□□ -1.71
VPS8Q8N3P4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC4.38□□□□□ -1.71
VPS8Q8N3P4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
VPS8Q8N3P4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS8Q8N3P4 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS8Q8N3P4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
VPS8Q8N3P4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS8Q8N3P4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
VPS8Q8N3P4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
VPS8Q8N3P4 MTND5P19-201ENST00000424872 1794 ntBASIC4.37□□□□□ -1.71
VPS8Q8N3P4 RAD1P1-201ENST00000231383 813 ntBASIC4.37□□□□□ -1.71
VPS8Q8N3P4 RNU6-7-201ENST00000364784 107 ntBASIC4.37□□□□□ -1.71
VPS8Q8N3P4 RNU6-8-201ENST00000365467 107 ntBASIC4.37□□□□□ -1.71
VPS8Q8N3P4 MIR181A2-201ENST00000384863 110 ntBASIC4.37□□□□□ -1.71
VPS8Q8N3P4 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS8Q8N3P4 FTH1P1-201ENST00000437933 532 ntBASIC4.37□□□□□ -1.71
VPS8Q8N3P4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS8Q8N3P4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS8Q8N3P4 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS8Q8N3P4 AL049874.4-201ENST00000557593 255 ntBASIC4.37□□□□□ -1.71
VPS8Q8N3P4 MIR5047-201ENST00000579212 100 ntBASIC4.37□□□□□ -1.71
VPS8Q8N3P4 MIR3162-201ENST00000581818 82 ntBASIC4.37□□□□□ -1.71
VPS8Q8N3P4 AC087468.1-201ENST00000604365 630 ntBASIC4.37□□□□□ -1.71
VPS8Q8N3P4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS8Q8N3P4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS8Q8N3P4 MIR181B1-201ENST00000385240 110 ntBASIC4.36□□□□□ -1.71
VPS8Q8N3P4 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS8Q8N3P4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS8Q8N3P4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS8Q8N3P4 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS8Q8N3P4 AC004924.1-201ENST00000480160 781 ntBASIC4.36□□□□□ -1.71
VPS8Q8N3P4 HIGD1AP3-201ENST00000515857 278 ntBASIC4.36□□□□□ -1.71
VPS8Q8N3P4 AF186190.1-201ENST00000517470 480 ntBASIC4.36□□□□□ -1.71
VPS8Q8N3P4 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.36□□□□□ -1.71
VPS8Q8N3P4 NPM1P35-201ENST00000533043 868 ntBASIC4.36□□□□□ -1.71
VPS8Q8N3P4 AC009101.1-201ENST00000568135 242 ntBASIC4.36□□□□□ -1.71
VPS8Q8N3P4 ELOCP29-201ENST00000588193 334 ntBASIC4.36□□□□□ -1.71
VPS8Q8N3P4 AC083760.1-201ENST00000589621 670 ntBASIC4.36□□□□□ -1.71
VPS8Q8N3P4 RPL12P50-201ENST00000603116 116 ntBASIC4.36□□□□□ -1.71
VPS8Q8N3P4 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS8Q8N3P4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS8Q8N3P4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS8Q8N3P4 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VPS8Q8N3P4 ANKRD36P1-201ENST00000344424 659 ntBASIC4.35□□□□□ -1.71
VPS8Q8N3P4 MIR26A1-201ENST00000362205 77 ntBASIC4.35□□□□□ -1.71
VPS8Q8N3P4 RNU6-1279P-201ENST00000383917 103 ntBASIC4.35□□□□□ -1.71
VPS8Q8N3P4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS8Q8N3P4 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS8Q8N3P4 AC108938.1-201ENST00000451204 136 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms