Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RNU6-925P-201ENST00000384629 104 ntBASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 RPL21P17-201ENST00000397467 475 ntBASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 AL159169.1-201ENST00000421119 127 ntBASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 IFNNP1-201ENST00000429219 553 ntBASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 AC244505.3-201ENST00000454598 187 ntBASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 SNORA84-201ENST00000459229 133 ntBASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 AC068305.1-201ENST00000497406 726 ntBASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 BTF3L4P4-201ENST00000506381 449 ntBASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 OR5H4P-201ENST00000510851 923 ntBASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 RN7SKP209-201ENST00000516888 304 ntBASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 AC010376.1-201ENST00000522101 334 ntBASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 AC104417.1-201ENST00000523974 751 ntBASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 AC004217.3-201ENST00000551552 878 ntBASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 AC008687.2-201ENST00000597865 520 ntBASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 AL606834.3-201ENST00000602615 496 ntBASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 RPAP2P1-201ENST00000603626 1168 ntBASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 Z82195.1-201ENST00000604558 398 ntBASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 AC002487.1-201ENST00000604565 994 ntBASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 AL445984.1-201ENST00000637834 659 ntBASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 MFSD8-236ENST00000641509 4050 ntBASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 AL645568.2-201ENST00000432815 1337 ntBASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 MAPK10-372ENST00000641954 3413 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 MTND4P8-201ENST00000514997 1362 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 AC111188.2-201ENST00000529697 1387 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 RNU6-236P-201ENST00000363886 106 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 RNA5SP51-201ENST00000364750 119 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 RNU6-1293P-201ENST00000384077 107 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 SNORA5A-201ENST00000384111 134 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 RNU6-1151P-201ENST00000384684 107 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 MIR16-1-201ENST00000385271 89 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 OR51A3P-201ENST00000413596 924 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 LIPT1P1-201ENST00000415870 1186 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 HMGB3P20-201ENST00000417997 600 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 AL035423.1-201ENST00000420331 213 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 AC013410.2-201ENST00000422627 201 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 AC092634.2-201ENST00000428146 1010 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 NDUFB1P1-201ENST00000435191 180 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 HMGN1P11-201ENST00000508668 303 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 AC005351.1-201ENST00000511152 786 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 AC008837.1-201ENST00000511513 412 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 RNU1-95P-201ENST00000516357 160 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 RNU1-128P-201ENST00000516704 160 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 IGHV3-32-201ENST00000519182 355 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 HIGD1AP6-201ENST00000521833 279 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 OR8I1P-201ENST00000529291 931 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 AC087897.1-201ENST00000550134 156 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 AC006213.4-201ENST00000616184 634 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 MIR6864-201ENST00000617935 70 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 RNU6-156P-201ENST00000621869 107 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 AC119674.1-207ENST00000641355 633 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms