Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCUBE3Q8IX30 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.72□□□□□ -1.33
SCUBE3Q8IX30 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.72□□□□□ -1.33
SCUBE3Q8IX30 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
SCUBE3Q8IX30 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCUBE3Q8IX30 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCUBE3Q8IX30 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
SCUBE3Q8IX30 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.71□□□□□ -1.33
SCUBE3Q8IX30 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.71□□□□□ -1.33
SCUBE3Q8IX30 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.71□□□□□ -1.33
SCUBE3Q8IX30 AC107081.3-201ENST00000612715 2034 ntBASIC6.71□□□□□ -1.33
SCUBE3Q8IX30 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 AC008957.3-201ENST00000624112 2242 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 SNORD27-201ENST00000363981 72 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 Y_RNA.297-201ENST00000364950 91 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 SNORD50B-201ENST00000364995 70 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 RNU6-95P-201ENST00000384697 107 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 RNU6-550P-201ENST00000391057 101 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 SAR1AP2-201ENST00000392696 594 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 AC097374.1-203ENST00000400783 485 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 U3.43-201ENST00000410734 213 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 RPL30P2-201ENST00000414021 291 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 RPL21P50-201ENST00000417698 477 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 AC098831.1-201ENST00000440661 216 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 RPS3AP12-201ENST00000443616 753 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 AC097359.1-201ENST00000447946 463 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 MTCO3P8-201ENST00000453691 755 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 AC083829.1-201ENST00000503756 657 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 AC016559.2-201ENST00000510759 359 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 AC106800.3-201ENST00000511389 308 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 AC097486.1-201ENST00000515331 210 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 RNU5B-3P-201ENST00000516601 115 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 AC091516.1-201ENST00000549191 703 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 AC005332.4-201ENST00000592752 579 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 AC025857.2-201ENST00000602711 238 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 RNF138P2-201ENST00000603490 592 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 AC022467.1-201ENST00000614738 749 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 AL596245.1-201ENST00000618994 362 ntBASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SCUBE3Q8IX30 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 TMCC1P1-201ENST00000518897 1980 ntBASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 RNA5SP433-201ENST00000364491 114 ntBASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 RNU6-125P-201ENST00000384505 107 ntBASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 RNU6-306P-201ENST00000384617 107 ntBASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 RN7SKP126-201ENST00000411143 300 ntBASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 CEACAMP9-201ENST00000442990 513 ntBASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 CYCSP24-201ENST00000445119 316 ntBASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 AP001992.1-205ENST00000462248 379 ntBASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 TRBVB-201ENST00000477100 408 ntBASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 ATP5LP5-201ENST00000483050 299 ntBASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 CEACAMP10-202ENST00000495431 496 ntBASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 RNU6-570P-201ENST00000517051 105 ntBASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 IGLVIV-64-201ENST00000518581 301 ntBASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 FAM60DP-201ENST00000524174 632 ntBASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC6.7□□□□□ -1.34
SCUBE3Q8IX30 AP001922.4-201ENST00000526967 290 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms