Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL009174.1-201ENST00000426577 416 ntBASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 AC093155.1-201ENST00000440164 826 ntBASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 AL133244.1-201ENST00000456007 258 ntBASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 RN7SL98P-201ENST00000462271 300 ntBASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 AC025674.1-201ENST00000507074 324 ntBASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 RNA5SP154-201ENST00000516193 111 ntBASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 RNU6-1225P-201ENST00000516336 65 ntBASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 RNU6-1178P-201ENST00000516674 107 ntBASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 IFITM8P-201ENST00000522529 394 ntBASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 CR383656.6-201ENST00000550518 394 ntBASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 AC090948.1-201ENST00000607464 549 ntBASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 AC126118.1-201ENST00000607744 628 ntBASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 AC008498.1-201ENST00000613012 531 ntBASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 MIR7844-201ENST00000616161 122 ntBASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 AP000346.3-201ENST00000622821 210 ntBASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 AL445363.3-201ENST00000623080 671 ntBASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 AC124312.6-202ENST00000623624 418 ntBASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 HSPA8P17-201ENST00000427029 1382 ntBASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 EIF2AP4-201ENST00000424793 1781 ntBASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 AC100871.1-201ENST00000507871 1456 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 RNA5SP52-201ENST00000362448 134 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 Y_RNA.311-201ENST00000365068 96 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 MIR192-201ENST00000384915 110 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 ZNF603P-201ENST00000405613 487 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 MTND1P21-201ENST00000412991 285 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 TPT1P2-201ENST00000413105 503 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 GAPDHP49-201ENST00000421421 961 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 RPS27AP7-201ENST00000422792 455 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 AL157831.1-201ENST00000426134 473 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 AC010975.2-201ENST00000427781 588 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 OR2B8P-201ENST00000432841 938 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 AL589765.3-201ENST00000446084 462 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 PHBP16-201ENST00000446318 950 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 AL592447.1-201ENST00000447592 540 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 SNRPGP9-201ENST00000456025 225 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 DYNLL1P6-201ENST00000503440 264 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 MYL12AP1-201ENST00000518490 515 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 AC022882.1-201ENST00000532142 501 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 AC245505.1-201ENST00000556398 224 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 CYP4A43P-201ENST00000568156 121 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 EIF1P6-201ENST00000600054 334 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 NDUFA8P1-201ENST00000605525 367 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 AC106028.5-201ENST00000610332 395 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 AC073348.1-201ENST00000623002 331 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 AC244258.1-201ENST00000637553 1071 ntBASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
ZNF549Q6P9A3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 LINC01109-201ENST00000603837 3081 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AC087190.4-201ENST00000574616 8334 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AC027228.2-201ENST00000567141 2154 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 RNU6-867P-201ENST00000364956 107 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms