Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 RIOK3P1-201ENST00000418778 1528 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 ZNF90P1-201ENST00000480493 1951 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 AC016716.1-201ENST00000265882 708 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 TAF9BP2-201ENST00000400856 499 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 AC069218.2-201ENST00000411665 344 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 RPL31P2-201ENST00000413849 377 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 MTCYBP24-201ENST00000420387 1106 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 SDCBPP2-201ENST00000424643 885 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 AP000907.1-201ENST00000428428 510 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 UBE2V1P1-201ENST00000430836 445 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 AL662791.1-201ENST00000441992 928 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 MRPL35P4-201ENST00000453682 566 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 AC099563.1-201ENST00000456086 418 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 AC004069.2-201ENST00000505438 1114 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 HMGB3P15-201ENST00000507326 574 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 AC016065.2-201ENST00000514530 444 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 AC103843.2-201ENST00000530523 682 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 PDCL2P2-201ENST00000533651 189 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 AC006116.10-201ENST00000591836 581 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 MIR7851-201ENST00000610611 160 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 MIR8058-201ENST00000615737 89 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 MIR7975-201ENST00000619350 68 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 AC012314.7-201ENST00000619693 93 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 AC104820.1-201ENST00000624183 307 ntBASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.34□□□□□ -1.87
H3F3CQ6NXT2 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
H3F3CQ6NXT2 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
H3F3CQ6NXT2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 AL356274.2-201ENST00000624379 3752 ntBASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 AL512646.1-201ENST00000269395 1077 ntBASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 RNU6-335P-201ENST00000364563 113 ntBASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 SNORD115-48-201ENST00000364764 76 ntBASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 MIR34B-201ENST00000385076 84 ntBASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 AL138880.1-201ENST00000405824 642 ntBASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 HMGB3P18-201ENST00000406327 590 ntBASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 RN7SKP285-201ENST00000410137 318 ntBASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 AC245052.5-201ENST00000416320 649 ntBASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 HMGB3P20-201ENST00000417997 600 ntBASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 AL590623.1-201ENST00000427864 105 ntBASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 XKRY2-201ENST00000442362 1093 ntBASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 AC233982.1-201ENST00000451247 436 ntBASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 DNAJC19P1-201ENST00000455312 319 ntBASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 HMGB3P14-201ENST00000494195 599 ntBASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 RNU6-579P-201ENST00000516879 102 ntBASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 MIR5047-201ENST00000579212 100 ntBASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 AC005412.1-201ENST00000580812 1049 ntBASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 AC007566.2-201ENST00000603642 413 ntBASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 AC090425.2-201ENST00000608818 501 ntBASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 AC091905.1-201ENST00000624400 311 ntBASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
H3F3CQ6NXT2 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms