Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC091046.3-201ENST00000631455 1574 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 AC099654.2-201ENST00000433031 1980 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 RNU6-339P-201ENST00000384310 107 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 Y_RNA.559-201ENST00000384686 107 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 MTCYBP36-201ENST00000404146 440 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 RNU2-15P-201ENST00000410692 191 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 AC013429.2-201ENST00000418798 781 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 RPL21P32-201ENST00000419877 477 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 AC006366.1-201ENST00000422002 759 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 C4BPAP2-201ENST00000428434 478 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 DNAJC19P7-201ENST00000428811 344 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 AC093414.1-201ENST00000434712 514 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 AP001992.1-205ENST00000462248 379 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 AC006967.1-201ENST00000467608 589 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 AP001025.2-201ENST00000490908 477 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 PRELID3BP7-201ENST00000503606 469 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 MTCO2P32-201ENST00000514865 403 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 IGKV1-32-201ENST00000519290 311 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 MIR4307-201ENST00000582802 84 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 MIR3611-201ENST00000584484 83 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 AL512782.1-201ENST00000603093 364 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 AC073091.2-201ENST00000603205 907 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 AC008782.1-201ENST00000603386 430 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 LLPHP1-201ENST00000603571 367 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 AC009951.1-201ENST00000623674 2614 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 DCAF13P1-201ENST00000495256 1330 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 AC017104.4-201ENST00000636283 1592 ntBASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CCDC144BQ3MJ40 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 OR11H4-201ENST00000315409 1082 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 AC126755.2-208ENST00000327792 462 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 AC138969.1-213ENST00000331436 462 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 Y_RNA.97-201ENST00000363094 102 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 SNORA2.3-201ENST00000383920 135 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 SNORA77-201ENST00000408716 125 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 RN7SKP56-201ENST00000410513 331 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 RN7SKP100-201ENST00000411258 284 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 RAD23BP1-201ENST00000421404 1227 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 AL592293.2-201ENST00000422292 996 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 RPL23AP33-201ENST00000442301 452 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 AL590399.6-201ENST00000446396 307 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 CEACAMP6-201ENST00000452007 574 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 AC009963.2-201ENST00000453431 138 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 CFTRP1-201ENST00000456646 183 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 AC073073.1-201ENST00000493920 463 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 MTCO3P44-201ENST00000510977 541 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 AC093677.1-201ENST00000514414 678 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 RN7SKP116-201ENST00000516902 319 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 IGKV2D-36-201ENST00000518643 226 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 RPL23AP53-201ENST00000521854 457 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 AP002963.1-201ENST00000530590 184 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 AP003385.6-201ENST00000531603 374 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 AC012213.3-201ENST00000577199 777 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 U73479.1-201ENST00000618062 168 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 AL596245.1-201ENST00000618994 362 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms