Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.03□□□□□ -1.6
IRF9Q00978 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.03□□□□□ -1.6
IRF9Q00978 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
IRF9Q00978 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.03□□□□□ -1.6
IRF9Q00978 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
IRF9Q00978 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.03□□□□□ -1.6
IRF9Q00978 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
IRF9Q00978 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
IRF9Q00978 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
IRF9Q00978 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
IRF9Q00978 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
IRF9Q00978 U3.2-201ENST00000362981 210 ntBASIC5.03□□□□□ -1.6
IRF9Q00978 RNU6-114P-201ENST00000384704 105 ntBASIC5.03□□□□□ -1.6
IRF9Q00978 U3.25-201ENST00000391209 220 ntBASIC5.03□□□□□ -1.6
IRF9Q00978 AC009804.1-201ENST00000400949 179 ntBASIC5.03□□□□□ -1.6
IRF9Q00978 FGF7P8-201ENST00000402994 292 ntBASIC5.03□□□□□ -1.6
IRF9Q00978 MRPL42P2-201ENST00000403169 426 ntBASIC5.03□□□□□ -1.6
IRF9Q00978 AL356421.1-201ENST00000403255 413 ntBASIC5.03□□□□□ -1.6
IRF9Q00978 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
IRF9Q00978 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.03□□□□□ -1.6
IRF9Q00978 MTND3P17-201ENST00000416968 344 ntBASIC5.03□□□□□ -1.6
IRF9Q00978 RPL36AP36-201ENST00000418616 301 ntBASIC5.03□□□□□ -1.6
IRF9Q00978 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.03□□□□□ -1.6
IRF9Q00978 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.03□□□□□ -1.6
IRF9Q00978 AC133104.1-201ENST00000429100 218 ntBASIC5.03□□□□□ -1.6
IRF9Q00978 AL590233.1-201ENST00000430017 456 ntBASIC5.03□□□□□ -1.6
IRF9Q00978 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.03□□□□□ -1.6
IRF9Q00978 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.03□□□□□ -1.6
IRF9Q00978 SDCBPP1-201ENST00000440192 890 ntBASIC5.03□□□□□ -1.6
IRF9Q00978 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.03□□□□□ -1.6
IRF9Q00978 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.03□□□□□ -1.6
IRF9Q00978 TCEA1P1-201ENST00000449716 880 ntBASIC5.03□□□□□ -1.6
IRF9Q00978 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.03□□□□□ -1.6
IRF9Q00978 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.03□□□□□ -1.6
IRF9Q00978 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.03□□□□□ -1.6
IRF9Q00978 AC011005.3-201ENST00000491624 395 ntBASIC5.03□□□□□ -1.6
IRF9Q00978 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.03□□□□□ -1.6
IRF9Q00978 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.03□□□□□ -1.6
IRF9Q00978 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.03□□□□□ -1.6
IRF9Q00978 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.03□□□□□ -1.6
IRF9Q00978 RNA5SP362-201ENST00000516048 118 ntBASIC5.03□□□□□ -1.6
IRF9Q00978 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
IRF9Q00978 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.03□□□□□ -1.6
IRF9Q00978 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
IRF9Q00978 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.03□□□□□ -1.6
IRF9Q00978 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
IRF9Q00978 AC107954.1-201ENST00000565906 727 ntBASIC5.03□□□□□ -1.6
IRF9Q00978 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.03□□□□□ -1.6
IRF9Q00978 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.03□□□□□ -1.6
IRF9Q00978 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.03□□□□□ -1.6
IRF9Q00978 LARP7P1-201ENST00000605576 316 ntBASIC5.03□□□□□ -1.6
IRF9Q00978 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.03□□□□□ -1.6
IRF9Q00978 AC002553.4-201ENST00000616896 331 ntBASIC5.03□□□□□ -1.6
IRF9Q00978 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.03□□□□□ -1.6
IRF9Q00978 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.03□□□□□ -1.6
IRF9Q00978 AC092125.1-201ENST00000562568 1995 ntBASIC5.03□□□□□ -1.6
IRF9Q00978 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
IRF9Q00978 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
IRF9Q00978 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
IRF9Q00978 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
IRF9Q00978 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
IRF9Q00978 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
IRF9Q00978 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.02□□□□□ -1.61
IRF9Q00978 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
IRF9Q00978 AC005332.5-201ENST00000591222 2919 ntBASIC5.02□□□□□ -1.61
IRF9Q00978 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
IRF9Q00978 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
IRF9Q00978 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
IRF9Q00978 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.02□□□□□ -1.61
IRF9Q00978 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.02□□□□□ -1.61
IRF9Q00978 RNU6-1090P-201ENST00000364065 94 ntBASIC5.02□□□□□ -1.61
IRF9Q00978 SNORA67-201ENST00000384423 137 ntBASIC5.02□□□□□ -1.61
IRF9Q00978 RNU6-878P-201ENST00000384578 110 ntBASIC5.02□□□□□ -1.61
IRF9Q00978 RN7SKP285-201ENST00000410137 318 ntBASIC5.02□□□□□ -1.61
IRF9Q00978 RN7SKP293-201ENST00000411389 296 ntBASIC5.02□□□□□ -1.61
IRF9Q00978 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.02□□□□□ -1.61
IRF9Q00978 AC078974.1-201ENST00000411597 223 ntBASIC5.02□□□□□ -1.61
IRF9Q00978 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.02□□□□□ -1.61
IRF9Q00978 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.02□□□□□ -1.61
IRF9Q00978 AC012065.2-201ENST00000421295 375 ntBASIC5.02□□□□□ -1.61
IRF9Q00978 OR2AH1P-201ENST00000425717 928 ntBASIC5.02□□□□□ -1.61
IRF9Q00978 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.02□□□□□ -1.61
IRF9Q00978 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.02□□□□□ -1.61
IRF9Q00978 AL691482.1-201ENST00000453255 87 ntBASIC5.02□□□□□ -1.61
IRF9Q00978 AP1S2P1-201ENST00000457344 379 ntBASIC5.02□□□□□ -1.61
IRF9Q00978 RPL7P15-201ENST00000461190 712 ntBASIC5.02□□□□□ -1.61
IRF9Q00978 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.02□□□□□ -1.61
IRF9Q00978 AC007182.2-201ENST00000489251 402 ntBASIC5.02□□□□□ -1.61
IRF9Q00978 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.02□□□□□ -1.61
IRF9Q00978 AC016065.2-201ENST00000514530 444 ntBASIC5.02□□□□□ -1.61
IRF9Q00978 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.02□□□□□ -1.61
IRF9Q00978 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
IRF9Q00978 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.02□□□□□ -1.61
IRF9Q00978 AC109635.3-201ENST00000529536 185 ntBASIC5.02□□□□□ -1.61
IRF9Q00978 AC005868.1-201ENST00000536421 331 ntBASIC5.02□□□□□ -1.61
IRF9Q00978 AC092470.1-201ENST00000546187 132 ntBASIC5.02□□□□□ -1.61
IRF9Q00978 AL157687.1-201ENST00000554853 619 ntBASIC5.02□□□□□ -1.61
IRF9Q00978 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.02□□□□□ -1.61
IRF9Q00978 NDUFB4P11-201ENST00000560510 395 ntBASIC5.02□□□□□ -1.61
IRF9Q00978 AC009101.1-201ENST00000568135 242 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms