Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.98□□□□□ -1.93
H3F3AP84243 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.98□□□□□ -1.93
H3F3AP84243 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
H3F3AP84243 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
H3F3AP84243 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
H3F3AP84243 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.98□□□□□ -1.93
H3F3AP84243 Z83843.1-201ENST00000604070 3685 ntBASIC2.97□□□□□ -1.93
H3F3AP84243 AC010733.2-201ENST00000589496 5702 ntBASIC2.97□□□□□ -1.93
H3F3AP84243 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.97□□□□□ -1.93
H3F3AP84243 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.97□□□□□ -1.93
H3F3AP84243 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.97□□□□□ -1.93
H3F3AP84243 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.97□□□□□ -1.93
H3F3AP84243 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
H3F3AP84243 RNA5SP391-201ENST00000363456 119 ntBASIC2.97□□□□□ -1.93
H3F3AP84243 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
H3F3AP84243 MIR591-201ENST00000385290 95 ntBASIC2.97□□□□□ -1.93
H3F3AP84243 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
H3F3AP84243 BTF3P9-201ENST00000418784 283 ntBASIC2.97□□□□□ -1.93
H3F3AP84243 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.97□□□□□ -1.93
H3F3AP84243 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.97□□□□□ -1.93
H3F3AP84243 AL358232.1-201ENST00000448030 501 ntBASIC2.97□□□□□ -1.93
H3F3AP84243 VN1R48P-201ENST00000448149 1036 ntBASIC2.97□□□□□ -1.93
H3F3AP84243 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.97□□□□□ -1.93
H3F3AP84243 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.97□□□□□ -1.93
H3F3AP84243 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.97□□□□□ -1.93
H3F3AP84243 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.97□□□□□ -1.93
H3F3AP84243 AC093755.1-201ENST00000512950 1023 ntBASIC2.97□□□□□ -1.93
H3F3AP84243 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.97□□□□□ -1.93
H3F3AP84243 RNA5SP380-201ENST00000517190 98 ntBASIC2.97□□□□□ -1.93
H3F3AP84243 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.97□□□□□ -1.93
H3F3AP84243 AP000619.3-201ENST00000535634 1127 ntBASIC2.97□□□□□ -1.93
H3F3AP84243 AC010198.2-201ENST00000550612 259 ntBASIC2.97□□□□□ -1.93
H3F3AP84243 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.97□□□□□ -1.93
H3F3AP84243 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.97□□□□□ -1.93
H3F3AP84243 MIR4276-201ENST00000584832 70 ntBASIC2.97□□□□□ -1.93
H3F3AP84243 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.97□□□□□ -1.93
H3F3AP84243 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.97□□□□□ -1.93
H3F3AP84243 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.97□□□□□ -1.93
H3F3AP84243 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.97□□□□□ -1.93
H3F3AP84243 AC022079.2-201ENST00000619739 566 ntBASIC2.97□□□□□ -1.93
H3F3AP84243 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.97□□□□□ -1.93
H3F3AP84243 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.97□□□□□ -1.93
H3F3AP84243 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC2.97□□□□□ -1.93
H3F3AP84243 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.97□□□□□ -1.93
H3F3AP84243 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
H3F3AP84243 MTCO1P12-201ENST00000414273 1543 ntBASIC2.97□□□□□ -1.93
H3F3AP84243 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.97□□□□□ -1.93
H3F3AP84243 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
H3F3AP84243 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.93
H3F3AP84243 SRP72P2-201ENST00000344851 1979 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.96□□□□□ -1.94
H3F3AP84243 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
H3F3AP84243 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
H3F3AP84243 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
H3F3AP84243 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
H3F3AP84243 RNU6-600P-201ENST00000362524 99 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
H3F3AP84243 RNA5SP31-201ENST00000411144 127 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 BX323014.1-201ENST00000412876 237 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 AC241520.1-201ENST00000422654 1099 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 ETF1P3-201ENST00000430422 1160 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
H3F3AP84243 NDUFA5P10-201ENST00000432147 357 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 AC023347.2-201ENST00000433994 462 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 CKS1BP5-201ENST00000434172 273 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 BX679664.1-201ENST00000434429 253 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 AL590103.1-201ENST00000434488 307 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 HMGB1P45-201ENST00000435986 653 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 MTCYBP12-201ENST00000440559 1134 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.96□□□□□ -1.94
H3F3AP84243 C1DP3-201ENST00000455013 423 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 AC146507.1-201ENST00000468335 354 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.96□□□□□ -1.94
H3F3AP84243 WBP1LP4-201ENST00000505043 344 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
H3F3AP84243 AC021146.7-201ENST00000509604 775 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 AC010285.3-201ENST00000511668 676 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 APOOP4-201ENST00000513530 597 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 ACTR6P1-201ENST00000514311 1104 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 RN7SKP116-201ENST00000516902 319 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.96□□□□□ -1.94
H3F3AP84243 RPL12P22-201ENST00000519073 490 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.96□□□□□ -1.94
H3F3AP84243 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.96□□□□□ -1.94
H3F3AP84243 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.96□□□□□ -1.94
H3F3AP84243 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.96□□□□□ -1.94
H3F3AP84243 OR6C73P-201ENST00000546432 358 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 AC004024.1-201ENST00000549244 247 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 SYF2P1-201ENST00000550658 413 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 CENPUP2-201ENST00000555897 1186 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 AC092868.3-201ENST00000560515 784 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 MTND4LP24-201ENST00000572277 291 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 AC053481.3-201ENST00000577881 843 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 AC015917.1-201ENST00000579654 510 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.96□□□□□ -1.94
H3F3AP84243 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.96□□□□□ -1.94
H3F3AP84243 uc_338.1-201ENST00000612113 180 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 AC011472.4-201ENST00000615848 491 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 SNORA50A-202ENST00000629536 136 ntBASIC2.96□□□□□ -1.94
H3F3AP84243 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms