Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RAE1P78406 OR10J6P-201ENST00000289731 930 ntBASIC4.34□□□□□ -1.71
RAE1P78406 RPL23AP57-201ENST00000332361 466 ntBASIC4.34□□□□□ -1.71
RAE1P78406 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RAE1P78406 Y_RNA.97-201ENST00000363094 102 ntBASIC4.34□□□□□ -1.71
RAE1P78406 RNA5SP87-201ENST00000384155 118 ntBASIC4.34□□□□□ -1.71
RAE1P78406 Y_RNA.517-201ENST00000384551 106 ntBASIC4.34□□□□□ -1.71
RAE1P78406 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RAE1P78406 EIF5P1-201ENST00000400019 1231 ntBASIC4.34□□□□□ -1.71
RAE1P78406 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RAE1P78406 RNU2-21P-201ENST00000410368 188 ntBASIC4.34□□□□□ -1.71
RAE1P78406 AC069218.2-201ENST00000411665 344 ntBASIC4.34□□□□□ -1.71
RAE1P78406 VDAC1P9-201ENST00000412766 841 ntBASIC4.34□□□□□ -1.71
RAE1P78406 AF274854.1-201ENST00000413236 615 ntBASIC4.34□□□□□ -1.71
RAE1P78406 AC109780.2-201ENST00000413467 845 ntBASIC4.34□□□□□ -1.71
RAE1P78406 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.34□□□□□ -1.71
RAE1P78406 OR5BE1P-201ENST00000425977 939 ntBASIC4.34□□□□□ -1.71
RAE1P78406 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.34□□□□□ -1.71
RAE1P78406 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.34□□□□□ -1.71
RAE1P78406 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RAE1P78406 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.34□□□□□ -1.71
RAE1P78406 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RAE1P78406 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RAE1P78406 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RAE1P78406 SNRPFP4-201ENST00000456366 242 ntBASIC4.34□□□□□ -1.71
RAE1P78406 TPT1P7-201ENST00000458300 517 ntBASIC4.34□□□□□ -1.71
RAE1P78406 AC011825.1-201ENST00000484967 388 ntBASIC4.34□□□□□ -1.71
RAE1P78406 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.34□□□□□ -1.71
RAE1P78406 RN7SL346P-201ENST00000491561 294 ntBASIC4.34□□□□□ -1.71
RAE1P78406 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.34□□□□□ -1.71
RAE1P78406 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.34□□□□□ -1.71
RAE1P78406 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.34□□□□□ -1.71
RAE1P78406 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.34□□□□□ -1.71
RAE1P78406 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.34□□□□□ -1.71
RAE1P78406 HSPA8P13-201ENST00000523715 472 ntBASIC4.34□□□□□ -1.71
RAE1P78406 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.34□□□□□ -1.71
RAE1P78406 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.34□□□□□ -1.71
RAE1P78406 GSTP1P1-201ENST00000548078 319 ntBASIC4.34□□□□□ -1.71
RAE1P78406 PCNPP1-201ENST00000552501 511 ntBASIC4.34□□□□□ -1.71
RAE1P78406 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.34□□□□□ -1.71
RAE1P78406 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.34□□□□□ -1.71
RAE1P78406 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.34□□□□□ -1.71
RAE1P78406 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.34□□□□□ -1.71
RAE1P78406 AC010546.1-201ENST00000569391 485 ntBASIC4.34□□□□□ -1.71
RAE1P78406 MAGOH2P-202ENST00000584384 429 ntBASIC4.34□□□□□ -1.71
RAE1P78406 MIR548AB-201ENST00000584917 84 ntBASIC4.34□□□□□ -1.71
RAE1P78406 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.34□□□□□ -1.71
RAE1P78406 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.34□□□□□ -1.71
RAE1P78406 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.34□□□□□ -1.71
RAE1P78406 AC018755.4-201ENST00000619715 454 ntBASIC4.34□□□□□ -1.71
RAE1P78406 OR5BE1P-202ENST00000641168 1176 ntBASIC4.34□□□□□ -1.71
RAE1P78406 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.34□□□□□ -1.71
RAE1P78406 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
RAE1P78406 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RAE1P78406 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.34□□□□□ -1.71
RAE1P78406 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
RAE1P78406 ZNF137P-201ENST00000456718 1920 ntBASIC4.34□□□□□ -1.71
RAE1P78406 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RAE1P78406 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.34□□□□□ -1.71
RAE1P78406 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RAE1P78406 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RAE1P78406 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.34□□□□□ -1.72
RAE1P78406 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RAE1P78406 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RAE1P78406 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.33□□□□□ -1.72
RAE1P78406 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RAE1P78406 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.33□□□□□ -1.72
RAE1P78406 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
RAE1P78406 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
RAE1P78406 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RAE1P78406 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.33□□□□□ -1.72
RAE1P78406 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.33□□□□□ -1.72
RAE1P78406 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RAE1P78406 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.33□□□□□ -1.72
RAE1P78406 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.33□□□□□ -1.72
RAE1P78406 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
RAE1P78406 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
RAE1P78406 ELL2P4-201ENST00000446870 1376 ntBASIC4.33□□□□□ -1.72
RAE1P78406 RNU6-1243P-201ENST00000364028 107 ntBASIC4.33□□□□□ -1.72
RAE1P78406 RN7SKP224-201ENST00000364140 325 ntBASIC4.33□□□□□ -1.72
RAE1P78406 MIR659-201ENST00000384963 97 ntBASIC4.33□□□□□ -1.72
RAE1P78406 ARF4P3-201ENST00000397387 509 ntBASIC4.33□□□□□ -1.72
RAE1P78406 Z98745.1-201ENST00000402553 494 ntBASIC4.33□□□□□ -1.72
RAE1P78406 MTCYBP36-201ENST00000404146 440 ntBASIC4.33□□□□□ -1.72
RAE1P78406 AL024474.1-201ENST00000404655 591 ntBASIC4.33□□□□□ -1.72
RAE1P78406 RN7SKP266-201ENST00000410232 287 ntBASIC4.33□□□□□ -1.72
RAE1P78406 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.33□□□□□ -1.72
RAE1P78406 OR8G2P-201ENST00000412796 908 ntBASIC4.33□□□□□ -1.72
RAE1P78406 RAD23BP1-201ENST00000421404 1227 ntBASIC4.33□□□□□ -1.72
RAE1P78406 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.33□□□□□ -1.72
RAE1P78406 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.33□□□□□ -1.72
RAE1P78406 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.33□□□□□ -1.72
RAE1P78406 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.33□□□□□ -1.72
RAE1P78406 USP9YP14-201ENST00000430663 563 ntBASIC4.33□□□□□ -1.72
RAE1P78406 PRELID3BP10-201ENST00000431957 584 ntBASIC4.33□□□□□ -1.72
RAE1P78406 RPL12P3-201ENST00000440080 396 ntBASIC4.33□□□□□ -1.72
RAE1P78406 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.33□□□□□ -1.72
RAE1P78406 AC092324.1-201ENST00000468671 324 ntBASIC4.33□□□□□ -1.72
RAE1P78406 RPL5P22-201ENST00000480199 884 ntBASIC4.33□□□□□ -1.72
RAE1P78406 AC106872.3-201ENST00000495104 446 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms