Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.58□□□□□ -1.84
TPM4P67936 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.58□□□□□ -1.84
TPM4P67936 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
TPM4P67936 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
TPM4P67936 RNA5SP295-201ENST00000362655 121 ntBASIC3.58□□□□□ -1.84
TPM4P67936 SNORA7.2-201ENST00000364446 145 ntBASIC3.58□□□□□ -1.84
TPM4P67936 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TPM4P67936 AL807761.1-201ENST00000417622 171 ntBASIC3.58□□□□□ -1.84
TPM4P67936 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.58□□□□□ -1.84
TPM4P67936 C4BPAP2-201ENST00000428434 478 ntBASIC3.58□□□□□ -1.84
TPM4P67936 AC073063.1-201ENST00000434352 607 ntBASIC3.58□□□□□ -1.84
TPM4P67936 ATP5C1P1-201ENST00000441945 895 ntBASIC3.58□□□□□ -1.84
TPM4P67936 MTCO3P17-201ENST00000443775 513 ntBASIC3.58□□□□□ -1.84
TPM4P67936 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.58□□□□□ -1.84
TPM4P67936 SLC31A1P1-201ENST00000451221 567 ntBASIC3.58□□□□□ -1.84
TPM4P67936 OR7L1P-201ENST00000456181 380 ntBASIC3.58□□□□□ -1.84
TPM4P67936 HMGN2P16-201ENST00000456802 261 ntBASIC3.58□□□□□ -1.84
TPM4P67936 AC147055.1-201ENST00000509261 750 ntBASIC3.58□□□□□ -1.84
TPM4P67936 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.58□□□□□ -1.84
TPM4P67936 RPL12P22-201ENST00000519073 490 ntBASIC3.58□□□□□ -1.84
TPM4P67936 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.58□□□□□ -1.84
TPM4P67936 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.58□□□□□ -1.84
TPM4P67936 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.58□□□□□ -1.84
TPM4P67936 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.58□□□□□ -1.84
TPM4P67936 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.58□□□□□ -1.84
TPM4P67936 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.58□□□□□ -1.84
TPM4P67936 AC115989.2-201ENST00000578640 563 ntBASIC3.58□□□□□ -1.84
TPM4P67936 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.58□□□□□ -1.84
TPM4P67936 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.58□□□□□ -1.84
TPM4P67936 AL365400.2-201ENST00000605604 902 ntBASIC3.58□□□□□ -1.84
TPM4P67936 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.58□□□□□ -1.84
TPM4P67936 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
TPM4P67936 AL356490.1-201ENST00000623079 479 ntBASIC3.58□□□□□ -1.84
TPM4P67936 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
TPM4P67936 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
TPM4P67936 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.58□□□□□ -1.84
TPM4P67936 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TPM4P67936 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TPM4P67936 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.58□□□□□ -1.84
TPM4P67936 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.57□□□□□ -1.84
TPM4P67936 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
TPM4P67936 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TPM4P67936 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TPM4P67936 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
TPM4P67936 RNU4-35P-201ENST00000362588 141 ntBASIC3.57□□□□□ -1.84
TPM4P67936 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
TPM4P67936 MIR937-201ENST00000401271 86 ntBASIC3.57□□□□□ -1.84
TPM4P67936 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.57□□□□□ -1.84
TPM4P67936 BX842559.1-201ENST00000419615 532 ntBASIC3.57□□□□□ -1.84
TPM4P67936 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TPM4P67936 RPL21P112-201ENST00000434403 463 ntBASIC3.57□□□□□ -1.84
TPM4P67936 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.57□□□□□ -1.84
TPM4P67936 HMGB1P12-201ENST00000438594 598 ntBASIC3.57□□□□□ -1.84
TPM4P67936 NOTCH2P1-201ENST00000443481 624 ntBASIC3.57□□□□□ -1.84
TPM4P67936 TPT1P12-201ENST00000448968 492 ntBASIC3.57□□□□□ -1.84
TPM4P67936 SBDSP1-204ENST00000453858 737 ntBASIC3.57□□□□□ -1.84
TPM4P67936 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.57□□□□□ -1.84
TPM4P67936 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.57□□□□□ -1.84
TPM4P67936 RN7SKP13-201ENST00000515933 244 ntBASIC3.57□□□□□ -1.84
TPM4P67936 IGKV2-36-201ENST00000519999 223 ntBASIC3.57□□□□□ -1.84
TPM4P67936 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.57□□□□□ -1.84
TPM4P67936 OR4T1P-201ENST00000554933 911 ntBASIC3.57□□□□□ -1.84
TPM4P67936 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.57□□□□□ -1.84
TPM4P67936 AC006116.7-201ENST00000590141 756 ntBASIC3.57□□□□□ -1.84
TPM4P67936 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
TPM4P67936 HMGN2P28-201ENST00000606102 262 ntBASIC3.57□□□□□ -1.84
TPM4P67936 AC012557.1-201ENST00000607115 611 ntBASIC3.57□□□□□ -1.84
TPM4P67936 AL354976.1-201ENST00000613843 387 ntBASIC3.57□□□□□ -1.84
TPM4P67936 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
TPM4P67936 AC084035.1-201ENST00000634543 607 ntBASIC3.57□□□□□ -1.84
TPM4P67936 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
TPM4P67936 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TPM4P67936 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TPM4P67936 AL049737.1-201ENST00000413920 1403 ntBASIC3.56□□□□□ -1.84
TPM4P67936 RNU6-600P-201ENST00000362524 99 ntBASIC3.56□□□□□ -1.84
TPM4P67936 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.56□□□□□ -1.84
TPM4P67936 RPL23AP47-201ENST00000408017 460 ntBASIC3.56□□□□□ -1.84
TPM4P67936 AC105402.1-201ENST00000413336 545 ntBASIC3.56□□□□□ -1.84
TPM4P67936 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.56□□□□□ -1.84
TPM4P67936 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.56□□□□□ -1.84
TPM4P67936 RBMY2UP-201ENST00000453474 324 ntBASIC3.56□□□□□ -1.84
TPM4P67936 VN1R17P-201ENST00000472048 1090 ntBASIC3.56□□□□□ -1.84
TPM4P67936 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.56□□□□□ -1.84
TPM4P67936 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.56□□□□□ -1.84
TPM4P67936 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.56□□□□□ -1.84
TPM4P67936 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.56□□□□□ -1.84
TPM4P67936 AC104619.4-201ENST00000510773 249 ntBASIC3.56□□□□□ -1.84
TPM4P67936 AC005351.1-201ENST00000511152 786 ntBASIC3.56□□□□□ -1.84
TPM4P67936 RN7SKP277-201ENST00000516895 283 ntBASIC3.56□□□□□ -1.84
TPM4P67936 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.56□□□□□ -1.84
TPM4P67936 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.56□□□□□ -1.84
TPM4P67936 AL162713.1-201ENST00000604480 262 ntBASIC3.56□□□□□ -1.84
TPM4P67936 AP004372.1-201ENST00000604842 844 ntBASIC3.56□□□□□ -1.84
TPM4P67936 MIR4496-201ENST00000635896 61 ntBASIC3.56□□□□□ -1.84
TPM4P67936 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
TPM4P67936 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.56□□□□□ -1.84
TPM4P67936 AC007256.1-201ENST00000392253 2765 ntBASIC3.56□□□□□ -1.84
TPM4P67936 AC026951.1-201ENST00000559530 2459 ntBASIC3.55□□□□□ -1.84
TPM4P67936 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.55□□□□□ -1.84
TPM4P67936 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms