Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RHBDL3P58872 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.07□□□□□ -1.6
RHBDL3P58872 KPNA2P2-201ENST00000419546 1489 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RHBDL3P58872 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RHBDL3P58872 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RHBDL3P58872 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RHBDL3P58872 MIR513B-201ENST00000385136 84 ntBASIC5.06□□□□□ -1.6
RHBDL3P58872 AC025750.1-201ENST00000399891 379 ntBASIC5.06□□□□□ -1.6
RHBDL3P58872 AL603766.1-201ENST00000407763 664 ntBASIC5.06□□□□□ -1.6
RHBDL3P58872 RPS3AP25-201ENST00000411660 793 ntBASIC5.06□□□□□ -1.6
RHBDL3P58872 AIMP1P1-201ENST00000418670 937 ntBASIC5.06□□□□□ -1.6
RHBDL3P58872 AC244098.2-201ENST00000422068 99 ntBASIC5.06□□□□□ -1.6
RHBDL3P58872 AL139421.1-201ENST00000423010 169 ntBASIC5.06□□□□□ -1.6
RHBDL3P58872 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.06□□□□□ -1.6
RHBDL3P58872 AL049610.1-201ENST00000423374 372 ntBASIC5.06□□□□□ -1.6
RHBDL3P58872 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.06□□□□□ -1.6
RHBDL3P58872 AC073587.1-201ENST00000447093 876 ntBASIC5.06□□□□□ -1.6
RHBDL3P58872 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.06□□□□□ -1.6
RHBDL3P58872 AC087312.1-201ENST00000471411 480 ntBASIC5.06□□□□□ -1.6
RHBDL3P58872 NCOR1P1-202ENST00000486162 291 ntBASIC5.06□□□□□ -1.6
RHBDL3P58872 AC108941.1-201ENST00000502853 530 ntBASIC5.06□□□□□ -1.6
RHBDL3P58872 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.06□□□□□ -1.6
RHBDL3P58872 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.06□□□□□ -1.6
RHBDL3P58872 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RHBDL3P58872 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.06□□□□□ -1.6
RHBDL3P58872 AC010198.2-201ENST00000550612 259 ntBASIC5.06□□□□□ -1.6
RHBDL3P58872 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.06□□□□□ -1.6
RHBDL3P58872 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.06□□□□□ -1.6
RHBDL3P58872 MIR1254-2-201ENST00000579553 63 ntBASIC5.06□□□□□ -1.6
RHBDL3P58872 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.06□□□□□ -1.6
RHBDL3P58872 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.06□□□□□ -1.6
RHBDL3P58872 AC026368.1-201ENST00000614934 690 ntBASIC5.06□□□□□ -1.6
RHBDL3P58872 MIR7151-201ENST00000617477 60 ntBASIC5.06□□□□□ -1.6
RHBDL3P58872 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RHBDL3P58872 AC010608.2-201ENST00000624830 470 ntBASIC5.06□□□□□ -1.6
RHBDL3P58872 AC138649.5-201ENST00000637456 137 ntBASIC5.06□□□□□ -1.6
RHBDL3P58872 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.06□□□□□ -1.6
RHBDL3P58872 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RHBDL3P58872 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RHBDL3P58872 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RHBDL3P58872 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RHBDL3P58872 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RHBDL3P58872 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.06□□□□□ -1.6
RHBDL3P58872 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RHBDL3P58872 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.06□□□□□ -1.6
RHBDL3P58872 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.05□□□□□ -1.6
RHBDL3P58872 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
RHBDL3P58872 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.05□□□□□ -1.6
RHBDL3P58872 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RHBDL3P58872 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RHBDL3P58872 AC006971.1-201ENST00000407916 4486 ntBASIC5.05□□□□□ -1.6
RHBDL3P58872 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RHBDL3P58872 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.05□□□□□ -1.6
RHBDL3P58872 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RHBDL3P58872 ARF4P3-201ENST00000397387 509 ntBASIC5.05□□□□□ -1.6
RHBDL3P58872 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.05□□□□□ -1.6
RHBDL3P58872 AL450338.1-201ENST00000407987 512 ntBASIC5.05□□□□□ -1.6
RHBDL3P58872 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.05□□□□□ -1.6
RHBDL3P58872 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.05□□□□□ -1.6
RHBDL3P58872 FNDC3CP-201ENST00000420795 1155 ntBASIC5.05□□□□□ -1.6
RHBDL3P58872 EIF1P3-201ENST00000423841 334 ntBASIC5.05□□□□□ -1.6
RHBDL3P58872 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.05□□□□□ -1.6
RHBDL3P58872 FTH1P6-201ENST00000430768 320 ntBASIC5.05□□□□□ -1.6
RHBDL3P58872 RPL21P89-201ENST00000444021 467 ntBASIC5.05□□□□□ -1.6
RHBDL3P58872 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.05□□□□□ -1.6
RHBDL3P58872 AC026410.2-201ENST00000460281 156 ntBASIC5.05□□□□□ -1.6
RHBDL3P58872 AL591473.1-201ENST00000464297 313 ntBASIC5.05□□□□□ -1.6
RHBDL3P58872 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.05□□□□□ -1.6
RHBDL3P58872 RPS15AP17-201ENST00000470598 390 ntBASIC5.05□□□□□ -1.6
RHBDL3P58872 AC007537.2-201ENST00000472093 511 ntBASIC5.05□□□□□ -1.6
RHBDL3P58872 AC109458.1-201ENST00000508858 316 ntBASIC5.05□□□□□ -1.6
RHBDL3P58872 AC010625.1-201ENST00000511296 403 ntBASIC5.05□□□□□ -1.6
RHBDL3P58872 RNU6-583P-201ENST00000516012 92 ntBASIC5.05□□□□□ -1.6
RHBDL3P58872 AC090151.1-201ENST00000520784 730 ntBASIC5.05□□□□□ -1.6
RHBDL3P58872 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.05□□□□□ -1.6
RHBDL3P58872 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.05□□□□□ -1.6
RHBDL3P58872 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.05□□□□□ -1.6
RHBDL3P58872 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.05□□□□□ -1.6
RHBDL3P58872 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.05□□□□□ -1.6
RHBDL3P58872 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.05□□□□□ -1.6
RHBDL3P58872 AC010928.3-201ENST00000587712 541 ntBASIC5.05□□□□□ -1.6
RHBDL3P58872 HMGN2P28-201ENST00000606102 262 ntBASIC5.05□□□□□ -1.6
RHBDL3P58872 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.05□□□□□ -1.6
RHBDL3P58872 AC006329.2-201ENST00000611491 394 ntBASIC5.05□□□□□ -1.6
RHBDL3P58872 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RHBDL3P58872 AC006386.1-201ENST00000619436 415 ntBASIC5.05□□□□□ -1.6
RHBDL3P58872 MIR4278-201ENST00000636094 69 ntBASIC5.05□□□□□ -1.6
RHBDL3P58872 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
RHBDL3P58872 LINC00561-201ENST00000565815 2738 ntBASIC5.05□□□□□ -1.6
RHBDL3P58872 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.05□□□□□ -1.6
RHBDL3P58872 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RHBDL3P58872 RLIMP1-201ENST00000339626 1680 ntBASIC5.05□□□□□ -1.6
RHBDL3P58872 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RHBDL3P58872 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RHBDL3P58872 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RHBDL3P58872 AL079343.1-201ENST00000572358 1771 ntBASIC5.04□□□□□ -1.6
RHBDL3P58872 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RHBDL3P58872 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
RHBDL3P58872 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms