Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN20P56880 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN20P56880 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.97□□□□□ -1.77
CLDN20P56880 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CLDN20P56880 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.97□□□□□ -1.77
CLDN20P56880 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN20P56880 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN20P56880 AL391994.1-201ENST00000254724 282 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 OR5P1P-201ENST00000299512 925 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 MIR331-201ENST00000362302 94 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 RNA5SP502-201ENST00000362694 119 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 RNU6-984P-201ENST00000363236 109 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 RNU6-1122P-201ENST00000384449 107 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 MIR3065-201ENST00000390137 79 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.97□□□□□ -1.77
CLDN20P56880 AL450338.1-201ENST00000407987 512 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 MIR1284-201ENST00000408337 120 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN20P56880 RAC1P3-201ENST00000416129 580 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 USP9YP26-201ENST00000421008 661 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN20P56880 CHIAP3-201ENST00000423668 1133 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN20P56880 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.97□□□□□ -1.77
CLDN20P56880 C4BPAP2-201ENST00000428434 478 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 RPS29P17-201ENST00000430795 166 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 RPL23AP25-201ENST00000430973 463 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 UBE2V1P3-201ENST00000439651 417 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.97□□□□□ -1.77
CLDN20P56880 PHBP16-201ENST00000446318 950 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 MTCO3P11-201ENST00000455103 774 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 RN7SL98P-201ENST00000462271 300 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 RPS20P21-201ENST00000466859 343 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN20P56880 AC005726.1-201ENST00000494679 427 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.97□□□□□ -1.77
CLDN20P56880 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
CLDN20P56880 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.97□□□□□ -1.77
CLDN20P56880 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.97□□□□□ -1.77
CLDN20P56880 AC105313.1-201ENST00000509121 353 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 AC002456.2-201ENST00000509356 380 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CLDN20P56880 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN20P56880 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN20P56880 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN20P56880 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.97□□□□□ -1.77
CLDN20P56880 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.97□□□□□ -1.77
CLDN20P56880 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.97□□□□□ -1.77
CLDN20P56880 AL389895.1-201ENST00000554127 252 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.97□□□□□ -1.77
CLDN20P56880 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.97□□□□□ -1.77
CLDN20P56880 HMGB3P26-201ENST00000560051 582 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 AGGF1P8-201ENST00000562979 1000 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.97□□□□□ -1.77
CLDN20P56880 AL512347.1-201ENST00000566420 503 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN20P56880 AC090616.2-202ENST00000584248 222 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN20P56880 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN20P56880 Z99497.2-201ENST00000603634 310 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 AC010201.1-201ENST00000605051 540 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.97□□□□□ -1.77
CLDN20P56880 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.97□□□□□ -1.77
CLDN20P56880 AC092650.2-201ENST00000619984 902 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CLDN20P56880 MIR6810-201ENST00000622701 70 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 AL359715.5-201ENST00000623431 443 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 AC026422.1-201ENST00000623961 452 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 AC009039.2-201ENST00000624524 529 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 AC007671.2-201ENST00000637344 619 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CLDN20P56880 AC011978.2-201ENST00000569835 2054 ntBASIC3.97□□□□□ -1.77
CLDN20P56880 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CLDN20P56880 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.96□□□□□ -1.77
CLDN20P56880 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.96□□□□□ -1.77
CLDN20P56880 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
CLDN20P56880 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.77
CLDN20P56880 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CLDN20P56880 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CLDN20P56880 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN20P56880 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN20P56880 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CLDN20P56880 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN20P56880 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CLDN20P56880 RNU6-657P-201ENST00000383904 107 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 RNU6-1200P-201ENST00000384162 107 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN20P56880 AL133384.1-201ENST00000412744 351 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 AC009518.2-201ENST00000418056 731 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN20P56880 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN20P56880 AL391219.1-201ENST00000422570 483 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN20P56880 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN20P56880 RPL23AP16-201ENST00000441715 421 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN20P56880 AL591503.2-201ENST00000442314 1005 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 DDX39BP2-208ENST00000453923 258 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 RPL18AP17-201ENST00000455326 198 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms