Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RNU7-170P-201ENST00000459303 61 ntBASIC3.91□□□□□ -1.78
PEX3P56589 RPS4XP6-201ENST00000477670 797 ntBASIC3.91□□□□□ -1.78
PEX3P56589 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.91□□□□□ -1.78
PEX3P56589 AC010285.3-201ENST00000511668 676 ntBASIC3.91□□□□□ -1.78
PEX3P56589 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.91□□□□□ -1.78
PEX3P56589 OR5AP1P-201ENST00000529730 940 ntBASIC3.91□□□□□ -1.78
PEX3P56589 OR4C2P-201ENST00000530855 1064 ntBASIC3.91□□□□□ -1.78
PEX3P56589 OR5B10P-201ENST00000532869 642 ntBASIC3.91□□□□□ -1.78
PEX3P56589 AC087894.1-201ENST00000538359 518 ntBASIC3.91□□□□□ -1.78
PEX3P56589 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.91□□□□□ -1.78
PEX3P56589 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PEX3P56589 YWHAZP1-201ENST00000556286 722 ntBASIC3.91□□□□□ -1.78
PEX3P56589 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.91□□□□□ -1.78
PEX3P56589 AC095057.3-201ENST00000567102 1157 ntBASIC3.91□□□□□ -1.78
PEX3P56589 MIR4444-1-201ENST00000581696 74 ntBASIC3.91□□□□□ -1.78
PEX3P56589 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
PEX3P56589 MIR4444-2-201ENST00000584390 74 ntBASIC3.91□□□□□ -1.78
PEX3P56589 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.91□□□□□ -1.78
PEX3P56589 AL357559.1-201ENST00000622228 274 ntBASIC3.91□□□□□ -1.78
PEX3P56589 AC243312.2-201ENST00000623340 601 ntBASIC3.91□□□□□ -1.78
PEX3P56589 AC099654.8-201ENST00000637757 681 ntBASIC3.91□□□□□ -1.78
PEX3P56589 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PEX3P56589 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.91□□□□□ -1.78
PEX3P56589 OTUD4P1-201ENST00000237841 3067 ntBASIC3.91□□□□□ -1.78
PEX3P56589 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PEX3P56589 NSRP1P1-201ENST00000444067 1693 ntBASIC3.9□□□□□ -1.78
PEX3P56589 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PEX3P56589 TNPO1P3-201ENST00000436471 2662 ntBASIC3.9□□□□□ -1.78
PEX3P56589 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
PEX3P56589 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PEX3P56589 FRG1CP-201ENST00000358464 769 ntBASIC3.9□□□□□ -1.79
PEX3P56589 RNU5B-1-201ENST00000363286 116 ntBASIC3.9□□□□□ -1.79
PEX3P56589 MIR449B-201ENST00000384995 97 ntBASIC3.9□□□□□ -1.79
PEX3P56589 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.9□□□□□ -1.79
PEX3P56589 AL590290.1-201ENST00000405336 380 ntBASIC3.9□□□□□ -1.79
PEX3P56589 RN7SKP53-201ENST00000411337 315 ntBASIC3.9□□□□□ -1.79
PEX3P56589 RNU6-603P-201ENST00000411403 107 ntBASIC3.9□□□□□ -1.79
PEX3P56589 CRYBB2P1-203ENST00000415709 538 ntBASIC3.9□□□□□ -1.79
PEX3P56589 TRGV6-201ENST00000417928 299 ntBASIC3.9□□□□□ -1.79
PEX3P56589 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.9□□□□□ -1.79
PEX3P56589 AC006989.1-201ENST00000427212 131 ntBASIC3.9□□□□□ -1.79
PEX3P56589 NPM1P24-201ENST00000428039 894 ntBASIC3.9□□□□□ -1.79
PEX3P56589 AC073069.1-201ENST00000428657 441 ntBASIC3.9□□□□□ -1.79
PEX3P56589 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.9□□□□□ -1.79
PEX3P56589 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.9□□□□□ -1.79
PEX3P56589 MRPS18BP2-201ENST00000434310 759 ntBASIC3.9□□□□□ -1.79
PEX3P56589 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.9□□□□□ -1.79
PEX3P56589 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.9□□□□□ -1.79
PEX3P56589 OR51B8P-201ENST00000449892 769 ntBASIC3.9□□□□□ -1.79
PEX3P56589 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.9□□□□□ -1.79
PEX3P56589 CAB39P1-201ENST00000502277 460 ntBASIC3.9□□□□□ -1.79
PEX3P56589 AC006499.5-201ENST00000505037 514 ntBASIC3.9□□□□□ -1.79
PEX3P56589 FTH1P9-201ENST00000513251 355 ntBASIC3.9□□□□□ -1.79
PEX3P56589 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.9□□□□□ -1.79
PEX3P56589 IGKV2-36-201ENST00000519999 223 ntBASIC3.9□□□□□ -1.79
PEX3P56589 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.9□□□□□ -1.79
PEX3P56589 AC103843.2-201ENST00000530523 682 ntBASIC3.9□□□□□ -1.79
PEX3P56589 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.9□□□□□ -1.79
PEX3P56589 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PEX3P56589 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.9□□□□□ -1.79
PEX3P56589 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.9□□□□□ -1.79
PEX3P56589 AC011611.5-201ENST00000552477 578 ntBASIC3.9□□□□□ -1.79
PEX3P56589 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.9□□□□□ -1.79
PEX3P56589 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.9□□□□□ -1.79
PEX3P56589 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.9□□□□□ -1.79
PEX3P56589 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.9□□□□□ -1.79
PEX3P56589 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
PEX3P56589 AC116447.1-201ENST00000613153 453 ntBASIC3.9□□□□□ -1.79
PEX3P56589 AC090772.4-201ENST00000623599 362 ntBASIC3.9□□□□□ -1.79
PEX3P56589 AC116563.2-201ENST00000624751 535 ntBASIC3.9□□□□□ -1.79
PEX3P56589 AC100871.1-201ENST00000507871 1456 ntBASIC3.9□□□□□ -1.79
PEX3P56589 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
PEX3P56589 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.9□□□□□ -1.79
PEX3P56589 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PEX3P56589 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
PEX3P56589 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PEX3P56589 EXOC5P1-201ENST00000510543 1969 ntBASIC3.89□□□□□ -1.79
PEX3P56589 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PEX3P56589 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PEX3P56589 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.89□□□□□ -1.79
PEX3P56589 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.89□□□□□ -1.79
PEX3P56589 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PEX3P56589 MIR1303-201ENST00000408625 86 ntBASIC3.89□□□□□ -1.79
PEX3P56589 RN7SKP177-201ENST00000410567 355 ntBASIC3.89□□□□□ -1.79
PEX3P56589 AC096533.1-201ENST00000411645 353 ntBASIC3.89□□□□□ -1.79
PEX3P56589 RHEBP3-201ENST00000411920 351 ntBASIC3.89□□□□□ -1.79
PEX3P56589 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.89□□□□□ -1.79
PEX3P56589 AC017079.2-201ENST00000416102 485 ntBASIC3.89□□□□□ -1.79
PEX3P56589 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.89□□□□□ -1.79
PEX3P56589 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.89□□□□□ -1.79
PEX3P56589 MTND2P9-201ENST00000422293 931 ntBASIC3.89□□□□□ -1.79
PEX3P56589 AL389915.1-201ENST00000422463 466 ntBASIC3.89□□□□□ -1.79
PEX3P56589 AL031663.1-201ENST00000437445 219 ntBASIC3.89□□□□□ -1.79
PEX3P56589 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PEX3P56589 RPS26P30-201ENST00000443431 335 ntBASIC3.89□□□□□ -1.79
PEX3P56589 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.89□□□□□ -1.79
PEX3P56589 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.89□□□□□ -1.79
PEX3P56589 PDSS1P2-201ENST00000449397 678 ntBASIC3.89□□□□□ -1.79
PEX3P56589 AC008280.2-201ENST00000455473 307 ntBASIC3.89□□□□□ -1.79
PEX3P56589 SNRPGP5-201ENST00000456003 220 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms