Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.51□□□□□ -1.69
SUMO3P55854 AP003385.6-201ENST00000531603 374 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 AC022880.1-201ENST00000534017 973 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.51□□□□□ -1.69
SUMO3P55854 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.51□□□□□ -1.69
SUMO3P55854 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.51□□□□□ -1.69
SUMO3P55854 ZNF415P1-201ENST00000582279 1166 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 LLPHP1-201ENST00000603571 367 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.51□□□□□ -1.69
SUMO3P55854 AC138749.5-201ENST00000611461 208 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 Z99129.1-201ENST00000612510 255 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 AC116165.2-201ENST00000616705 206 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 AC091925.2-201ENST00000625059 256 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.51□□□□□ -1.69
SUMO3P55854 MTND4P5-201ENST00000435821 1374 ntBASIC4.51□□□□□ -1.69
SUMO3P55854 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SUMO3P55854 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.51□□□□□ -1.69
SUMO3P55854 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SUMO3P55854 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SUMO3P55854 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.5□□□□□ -1.69
SUMO3P55854 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SUMO3P55854 AC109780.1-201ENST00000451768 1344 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SUMO3P55854 LINC01109-201ENST00000603837 3081 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.5□□□□□ -1.69
SUMO3P55854 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SUMO3P55854 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.5□□□□□ -1.69
SUMO3P55854 RNU6-853P-201ENST00000364306 107 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 Y_RNA.234-201ENST00000364409 97 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 RNU6-359P-201ENST00000365466 108 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SUMO3P55854 SNORD51-201ENST00000384320 80 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 RNU6-348P-201ENST00000384386 107 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 Y_RNA.517-201ENST00000384551 106 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 AC013442.1-201ENST00000397347 228 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.5□□□□□ -1.69
SUMO3P55854 RNA5SP56-201ENST00000410277 118 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 Y_RNA.608-201ENST00000410647 95 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.5□□□□□ -1.69
SUMO3P55854 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.5□□□□□ -1.69
SUMO3P55854 USP9YP13-201ENST00000417797 480 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 AF186996.5-201ENST00000418098 904 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.5□□□□□ -1.69
SUMO3P55854 MTCYBP24-201ENST00000420387 1106 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.5□□□□□ -1.69
SUMO3P55854 RPS12P5-201ENST00000423449 371 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 RHOT1P3-201ENST00000436571 331 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 AC091862.1-201ENST00000438016 1100 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 SLC25A18P1-201ENST00000449385 454 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.5□□□□□ -1.69
SUMO3P55854 AL356981.1-201ENST00000454879 684 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 snoU109.4-201ENST00000458953 143 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 OR9M1P-201ENST00000459641 921 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 AP000942.1-201ENST00000463969 747 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 RPS4XP10-201ENST00000465034 731 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.5□□□□□ -1.69
SUMO3P55854 NIP7P2-201ENST00000485801 544 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.5□□□□□ -1.69
SUMO3P55854 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SUMO3P55854 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.5□□□□□ -1.69
SUMO3P55854 ENPP7P9-201ENST00000514456 627 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 RNU6-27P-201ENST00000516146 107 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 RNU6-714P-201ENST00000516963 103 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.5□□□□□ -1.69
SUMO3P55854 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SUMO3P55854 EEF1B2P4-201ENST00000551398 348 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.5□□□□□ -1.69
SUMO3P55854 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.5□□□□□ -1.69
SUMO3P55854 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.5□□□□□ -1.69
SUMO3P55854 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.5□□□□□ -1.69
SUMO3P55854 AC015871.2-201ENST00000603605 948 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 NDUFA8P1-201ENST00000605525 367 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 AC092354.2-201ENST00000607786 514 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 AP001521.2-201ENST00000608772 546 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 AC006329.2-201ENST00000611491 394 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 AC016769.4-201ENST00000616893 535 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 AL139089.1-201ENST00000620372 975 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 AC091905.4-201ENST00000623432 202 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 CR381572.2-201ENST00000624852 397 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.5□□□□□ -1.69
SUMO3P55854 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.5□□□□□ -1.69
SUMO3P55854 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SUMO3P55854 MTND5P29-201ENST00000458676 1807 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
SUMO3P55854 MAPK10-263ENST00000641052 4307 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 AC100778.3-201ENST00000580060 1750 ntBASIC4.5□□□□□ -1.69
SUMO3P55854 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SUMO3P55854 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SUMO3P55854 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SUMO3P55854 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SUMO3P55854 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.49□□□□□ -1.69
SUMO3P55854 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SUMO3P55854 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SUMO3P55854 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.49□□□□□ -1.69
SUMO3P55854 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SUMO3P55854 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SUMO3P55854 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SUMO3P55854 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
SUMO3P55854 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms