Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
PKNOX1P55347 MTND5P3-201ENST00000438536 1800 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.45□□□□□ -1.86
PKNOX1P55347 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PKNOX1P55347 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PKNOX1P55347 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.45□□□□□ -1.86
PKNOX1P55347 BX664727.1-201ENST00000416024 466 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.45□□□□□ -1.86
PKNOX1P55347 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.45□□□□□ -1.86
PKNOX1P55347 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.45□□□□□ -1.86
PKNOX1P55347 AC004865.1-201ENST00000442276 1003 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 RPL23AP15-201ENST00000450202 459 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 AC233982.1-201ENST00000451247 436 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PKNOX1P55347 AC006539.3-201ENST00000454258 129 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.45□□□□□ -1.86
PKNOX1P55347 RPL6P9-201ENST00000466502 859 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 RN7SL442P-201ENST00000473804 320 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PKNOX1P55347 RPS27P23-201ENST00000487608 251 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 CEACAMP10-202ENST00000495431 496 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.45□□□□□ -1.86
PKNOX1P55347 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.45□□□□□ -1.86
PKNOX1P55347 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
PKNOX1P55347 AC104108.1-201ENST00000509930 412 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.45□□□□□ -1.86
PKNOX1P55347 RPL7L1P13-201ENST00000511702 739 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 AC023141.12-201ENST00000512399 199 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 MTCO1P30-201ENST00000515244 580 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 RN7SKP96-201ENST00000516948 297 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.45□□□□□ -1.86
PKNOX1P55347 AF279873.1-201ENST00000523393 313 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.45□□□□□ -1.86
PKNOX1P55347 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PKNOX1P55347 AP003717.3-201ENST00000544832 1180 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.45□□□□□ -1.86
PKNOX1P55347 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.45□□□□□ -1.86
PKNOX1P55347 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.45□□□□□ -1.86
PKNOX1P55347 AC095057.3-201ENST00000567102 1157 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 AC136624.4-201ENST00000573044 370 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.45□□□□□ -1.86
PKNOX1P55347 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.45□□□□□ -1.86
PKNOX1P55347 AC022146.1-201ENST00000595307 847 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 AC098483.2-201ENST00000603158 454 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 BNIP3P4-201ENST00000604946 565 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.45□□□□□ -1.86
PKNOX1P55347 MIR378J-201ENST00000611988 109 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 MIR8058-201ENST00000615737 89 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 XIST_intron.1-201ENST00000619444 68 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.45□□□□□ -1.86
PKNOX1P55347 AC110801.1-201ENST00000623590 212 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.45□□□□□ -1.86
PKNOX1P55347 AL356118.1-201ENST00000635272 1078 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PKNOX1P55347 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PKNOX1P55347 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PKNOX1P55347 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.44□□□□□ -1.86
PKNOX1P55347 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PKNOX1P55347 AC090337.1-201ENST00000579651 2074 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.44□□□□□ -1.86
PKNOX1P55347 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PKNOX1P55347 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PKNOX1P55347 RNU2-72P-201ENST00000411175 163 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.44□□□□□ -1.86
PKNOX1P55347 RPS15AP40-201ENST00000419621 391 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 RPS15AP6-201ENST00000420703 385 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 UBE2D3P3-201ENST00000426992 425 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.44□□□□□ -1.86
PKNOX1P55347 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.44□□□□□ -1.86
PKNOX1P55347 MTCYBP31-201ENST00000438855 1122 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.44□□□□□ -1.86
PKNOX1P55347 HMGN2P21-201ENST00000447764 270 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 HMGB3P8-201ENST00000449709 577 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.44□□□□□ -1.86
PKNOX1P55347 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.44□□□□□ -1.86
PKNOX1P55347 RPL32P14-201ENST00000463196 378 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.44□□□□□ -1.86
PKNOX1P55347 AP000893.1-201ENST00000474462 794 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 AC007688.1-201ENST00000475592 759 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.44□□□□□ -1.86
PKNOX1P55347 GAPDHP36-201ENST00000480688 918 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 AP000563.1-201ENST00000490865 758 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.44□□□□□ -1.86
PKNOX1P55347 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PKNOX1P55347 TMEM248P1-201ENST00000510579 951 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 SNORA70.19-201ENST00000516717 90 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 RN7SKP277-201ENST00000516895 283 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 RNU4-60P-201ENST00000517239 135 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.44□□□□□ -1.86
PKNOX1P55347 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.44□□□□□ -1.86
PKNOX1P55347 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.44□□□□□ -1.86
PKNOX1P55347 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.44□□□□□ -1.86
PKNOX1P55347 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.44□□□□□ -1.86
PKNOX1P55347 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.44□□□□□ -1.86
PKNOX1P55347 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.44□□□□□ -1.86
PKNOX1P55347 PARP1P2-201ENST00000556806 195 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.44□□□□□ -1.86
PKNOX1P55347 AC007224.1-201ENST00000564410 144 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.44□□□□□ -1.86
PKNOX1P55347 MIR5685-201ENST00000579080 79 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms