Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC116533.1-201ENST00000459748 321 ntBASIC3.99□□□□□ -1.77
CDH13P55290 AC011276.1-201ENST00000469688 323 ntBASIC3.99□□□□□ -1.77
CDH13P55290 RPS29P22-201ENST00000472363 168 ntBASIC3.99□□□□□ -1.77
CDH13P55290 AC041039.1-201ENST00000485656 536 ntBASIC3.99□□□□□ -1.77
CDH13P55290 CDH12P4-201ENST00000517835 295 ntBASIC3.99□□□□□ -1.77
CDH13P55290 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH13P55290 CDH12P3-201ENST00000517935 295 ntBASIC3.99□□□□□ -1.77
CDH13P55290 CDH12P1-201ENST00000518435 295 ntBASIC3.99□□□□□ -1.77
CDH13P55290 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH13P55290 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH13P55290 MTCO2P15-201ENST00000532655 656 ntBASIC3.99□□□□□ -1.77
CDH13P55290 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH13P55290 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH13P55290 AC023050.2-201ENST00000544968 387 ntBASIC3.99□□□□□ -1.77
CDH13P55290 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH13P55290 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.99□□□□□ -1.77
CDH13P55290 HIGD1AP17-201ENST00000554576 276 ntBASIC3.99□□□□□ -1.77
CDH13P55290 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH13P55290 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH13P55290 AC005412.1-201ENST00000580812 1049 ntBASIC3.99□□□□□ -1.77
CDH13P55290 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH13P55290 AL451044.1-201ENST00000604867 238 ntBASIC3.99□□□□□ -1.77
CDH13P55290 OR6R2P-201ENST00000609216 300 ntBASIC3.99□□□□□ -1.77
CDH13P55290 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH13P55290 AF001550.2-201ENST00000636643 217 ntBASIC3.99□□□□□ -1.77
CDH13P55290 AC006927.4-201ENST00000639187 543 ntBASIC3.99□□□□□ -1.77
CDH13P55290 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH13P55290 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH13P55290 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH13P55290 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH13P55290 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH13P55290 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH13P55290 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH13P55290 AC008725.1-201ENST00000605123 2263 ntBASIC3.98□□□□□ -1.77
CDH13P55290 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDH13P55290 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.98□□□□□ -1.77
CDH13P55290 SEPT7P7-201ENST00000420492 1301 ntBASIC3.98□□□□□ -1.77
CDH13P55290 DCAF13P1-201ENST00000495256 1330 ntBASIC3.98□□□□□ -1.77
CDH13P55290 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH13P55290 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDH13P55290 AC116667.1-201ENST00000604855 2072 ntBASIC3.98□□□□□ -1.77
CDH13P55290 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CDH13P55290 RNU4-28P-201ENST00000364739 141 ntBASIC3.98□□□□□ -1.77
CDH13P55290 SNORA51.6-201ENST00000384151 125 ntBASIC3.98□□□□□ -1.77
CDH13P55290 OR8G2P-201ENST00000412796 908 ntBASIC3.98□□□□□ -1.77
CDH13P55290 AL358472.1-201ENST00000431295 329 ntBASIC3.98□□□□□ -1.77
CDH13P55290 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH13P55290 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.98□□□□□ -1.77
CDH13P55290 MTCYBP11-201ENST00000447254 1109 ntBASIC3.98□□□□□ -1.77
CDH13P55290 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH13P55290 RPS29P33-201ENST00000456717 146 ntBASIC3.98□□□□□ -1.77
CDH13P55290 AL133477.1-201ENST00000457472 514 ntBASIC3.98□□□□□ -1.77
CDH13P55290 AC007686.1-201ENST00000488511 463 ntBASIC3.98□□□□□ -1.77
CDH13P55290 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH13P55290 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.98□□□□□ -1.77
CDH13P55290 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH13P55290 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDH13P55290 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH13P55290 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDH13P55290 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.98□□□□□ -1.77
CDH13P55290 AC069366.1-201ENST00000583159 838 ntBASIC3.98□□□□□ -1.77
CDH13P55290 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH13P55290 MRPS35P3-201ENST00000603189 709 ntBASIC3.98□□□□□ -1.77
CDH13P55290 AC114878.2-201ENST00000604863 1251 ntBASIC3.98□□□□□ -1.77
CDH13P55290 AL451074.6-201ENST00000608512 729 ntBASIC3.98□□□□□ -1.77
CDH13P55290 AP001521.1-201ENST00000609150 300 ntBASIC3.98□□□□□ -1.77
CDH13P55290 AL355816.2-201ENST00000610049 647 ntBASIC3.98□□□□□ -1.77
CDH13P55290 AC008083.4-201ENST00000615076 444 ntBASIC3.98□□□□□ -1.77
CDH13P55290 AC231759.1-201ENST00000616455 597 ntBASIC3.98□□□□□ -1.77
CDH13P55290 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH13P55290 AC013470.4-201ENST00000619978 986 ntBASIC3.98□□□□□ -1.77
CDH13P55290 AC006065.5-201ENST00000623427 349 ntBASIC3.98□□□□□ -1.77
CDH13P55290 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.98□□□□□ -1.77
CDH13P55290 AC120349.2-201ENST00000625002 298 ntBASIC3.98□□□□□ -1.77
CDH13P55290 AC008993.2-201ENST00000631744 806 ntBASIC3.98□□□□□ -1.77
CDH13P55290 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDH13P55290 ZNF734P-201ENST00000419494 1534 ntBASIC3.98□□□□□ -1.77
CDH13P55290 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDH13P55290 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.98□□□□□ -1.77
CDH13P55290 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDH13P55290 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH13P55290 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDH13P55290 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CDH13P55290 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH13P55290 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.98□□□□□ -1.77
CDH13P55290 AC090337.1-201ENST00000579651 2074 ntBASIC3.98□□□□□ -1.77
CDH13P55290 MTND5P3-201ENST00000438536 1800 ntBASIC3.98□□□□□ -1.77
CDH13P55290 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDH13P55290 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDH13P55290 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDH13P55290 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDH13P55290 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CDH13P55290 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH13P55290 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.97□□□□□ -1.77
CDH13P55290 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH13P55290 U3.15-201ENST00000365398 212 ntBASIC3.97□□□□□ -1.77
CDH13P55290 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH13P55290 AL603766.1-201ENST00000407763 664 ntBASIC3.97□□□□□ -1.77
CDH13P55290 RPL22P18-201ENST00000417197 377 ntBASIC3.97□□□□□ -1.77
CDH13P55290 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms