Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 MIR30E-201ENST00000362104 92 ntBASIC3.58□□□□□ -1.84
CDH6P55285 RNU6-252P-201ENST00000363232 107 ntBASIC3.58□□□□□ -1.84
CDH6P55285 SNORA62.3-201ENST00000365110 153 ntBASIC3.58□□□□□ -1.84
CDH6P55285 MIR184-201ENST00000384962 84 ntBASIC3.58□□□□□ -1.84
CDH6P55285 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDH6P55285 BTBD10P2-201ENST00000404779 676 ntBASIC3.58□□□□□ -1.84
CDH6P55285 MTCO3P31-201ENST00000405526 789 ntBASIC3.58□□□□□ -1.84
CDH6P55285 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH6P55285 CRYBB2P1-203ENST00000415709 538 ntBASIC3.58□□□□□ -1.84
CDH6P55285 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.58□□□□□ -1.84
CDH6P55285 AL513174.1-201ENST00000423182 629 ntBASIC3.58□□□□□ -1.84
CDH6P55285 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH6P55285 CKS1BP5-201ENST00000434172 273 ntBASIC3.58□□□□□ -1.84
CDH6P55285 MTCYBP31-201ENST00000438855 1122 ntBASIC3.58□□□□□ -1.84
CDH6P55285 AC068135.1-201ENST00000446164 246 ntBASIC3.58□□□□□ -1.84
CDH6P55285 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CDH6P55285 RPL12P26-201ENST00000452430 487 ntBASIC3.58□□□□□ -1.84
CDH6P55285 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH6P55285 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.58□□□□□ -1.84
CDH6P55285 TMEM248P1-201ENST00000510579 951 ntBASIC3.58□□□□□ -1.84
CDH6P55285 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.58□□□□□ -1.84
CDH6P55285 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH6P55285 NDUFB9P3-201ENST00000521269 501 ntBASIC3.58□□□□□ -1.84
CDH6P55285 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH6P55285 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH6P55285 AL139174.1-201ENST00000531489 886 ntBASIC3.58□□□□□ -1.84
CDH6P55285 PDCL2P2-201ENST00000533651 189 ntBASIC3.58□□□□□ -1.84
CDH6P55285 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH6P55285 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.58□□□□□ -1.84
CDH6P55285 AC067852.3-201ENST00000589177 561 ntBASIC3.58□□□□□ -1.84
CDH6P55285 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH6P55285 AC100814.1-201ENST00000606963 623 ntBASIC3.58□□□□□ -1.84
CDH6P55285 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH6P55285 AC092628.2-201ENST00000622492 339 ntBASIC3.58□□□□□ -1.84
CDH6P55285 TNPO1P3-201ENST00000436471 2662 ntBASIC3.58□□□□□ -1.84
CDH6P55285 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDH6P55285 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDH6P55285 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDH6P55285 MTCO1P24-201ENST00000515438 1558 ntBASIC3.58□□□□□ -1.84
CDH6P55285 AL645937.1-201ENST00000641739 1652 ntBASIC3.58□□□□□ -1.84
CDH6P55285 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH6P55285 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CDH6P55285 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CDH6P55285 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH6P55285 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH6P55285 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH6P55285 RSL24D1P1-201ENST00000404972 493 ntBASIC3.57□□□□□ -1.84
CDH6P55285 HSPE1P26-201ENST00000405341 275 ntBASIC3.57□□□□□ -1.84
CDH6P55285 AL353692.2-201ENST00000407054 335 ntBASIC3.57□□□□□ -1.84
CDH6P55285 AP000907.1-201ENST00000428428 510 ntBASIC3.57□□□□□ -1.84
CDH6P55285 OR51AB1P-201ENST00000429046 620 ntBASIC3.57□□□□□ -1.84
CDH6P55285 HSPD1P21-201ENST00000436541 245 ntBASIC3.57□□□□□ -1.84
CDH6P55285 CYCSP43-201ENST00000438233 310 ntBASIC3.57□□□□□ -1.84
CDH6P55285 AC092641.1-201ENST00000440229 772 ntBASIC3.57□□□□□ -1.84
CDH6P55285 AC007000.2-201ENST00000442564 487 ntBASIC3.57□□□□□ -1.84
CDH6P55285 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH6P55285 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH6P55285 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH6P55285 AC025518.1-201ENST00000479856 347 ntBASIC3.57□□□□□ -1.84
CDH6P55285 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH6P55285 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH6P55285 AC078918.1-201ENST00000498515 228 ntBASIC3.57□□□□□ -1.84
CDH6P55285 HMGN1P15-201ENST00000513870 295 ntBASIC3.57□□□□□ -1.84
CDH6P55285 RN7SKP60-201ENST00000516985 239 ntBASIC3.57□□□□□ -1.84
CDH6P55285 AC107934.2-201ENST00000518653 310 ntBASIC3.57□□□□□ -1.84
CDH6P55285 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.57□□□□□ -1.84
CDH6P55285 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.57□□□□□ -1.84
CDH6P55285 AL442163.2-201ENST00000553912 710 ntBASIC3.57□□□□□ -1.84
CDH6P55285 SERPINE4P-201ENST00000554978 281 ntBASIC3.57□□□□□ -1.84
CDH6P55285 CKS1BP1-201ENST00000555221 240 ntBASIC3.57□□□□□ -1.84
CDH6P55285 AC025918.2-201ENST00000558683 763 ntBASIC3.57□□□□□ -1.84
CDH6P55285 AC233266.2-201ENST00000567067 528 ntBASIC3.57□□□□□ -1.84
CDH6P55285 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CDH6P55285 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
CDH6P55285 AC091152.2-201ENST00000591628 2569 ntBASIC3.57□□□□□ -1.84
CDH6P55285 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.57□□□□□ -1.84
CDH6P55285 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH6P55285 AL592295.2-201ENST00000612578 206 ntBASIC3.57□□□□□ -1.84
CDH6P55285 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.57□□□□□ -1.84
CDH6P55285 STMN1P1-201ENST00000617809 440 ntBASIC3.57□□□□□ -1.84
CDH6P55285 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH6P55285 AC110801.1-201ENST00000623590 212 ntBASIC3.57□□□□□ -1.84
CDH6P55285 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH6P55285 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
CDH6P55285 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH6P55285 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH6P55285 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CDH6P55285 AL355379.1-201ENST00000405542 640 ntBASIC3.56□□□□□ -1.84
CDH6P55285 RNU6-55P-201ENST00000411092 107 ntBASIC3.56□□□□□ -1.84
CDH6P55285 RNU6-954P-201ENST00000411355 107 ntBASIC3.56□□□□□ -1.84
CDH6P55285 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH6P55285 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH6P55285 Z99755.1-201ENST00000414048 380 ntBASIC3.56□□□□□ -1.84
CDH6P55285 TATDN1P1-201ENST00000414123 891 ntBASIC3.56□□□□□ -1.84
CDH6P55285 AC023128.2-201ENST00000420880 1223 ntBASIC3.56□□□□□ -1.84
CDH6P55285 ARL2BPP3-201ENST00000421226 480 ntBASIC3.56□□□□□ -1.84
CDH6P55285 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH6P55285 ATP5JP1-201ENST00000431631 322 ntBASIC3.56□□□□□ -1.84
CDH6P55285 AC073063.1-201ENST00000434352 607 ntBASIC3.56□□□□□ -1.84
CDH6P55285 RPS27P5-201ENST00000444247 244 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms