Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SMARCA4P51532 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SMARCA4P51532 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.08□□□□□ -1.6
SMARCA4P51532 HMGB3P6-201ENST00000444896 598 ntBASIC5.08□□□□□ -1.6
SMARCA4P51532 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.08□□□□□ -1.6
SMARCA4P51532 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.08□□□□□ -1.6
SMARCA4P51532 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SMARCA4P51532 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SMARCA4P51532 MAPK10-373ENST00000641983 6772 ntBASIC5.07□□□□□ -1.6
SMARCA4P51532 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
SMARCA4P51532 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SMARCA4P51532 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SMARCA4P51532 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.07□□□□□ -1.6
SMARCA4P51532 OR5H3P-201ENST00000502817 919 ntBASIC5.07□□□□□ -1.6
SMARCA4P51532 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.07□□□□□ -1.6
SMARCA4P51532 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SMARCA4P51532 RMST_8.1-201ENST00000610287 165 ntBASIC5.07□□□□□ -1.6
SMARCA4P51532 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SMARCA4P51532 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.07□□□□□ -1.6
SMARCA4P51532 ZNF658B-202ENST00000615961 3375 ntBASIC5.07□□□□□ -1.6
SMARCA4P51532 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SMARCA4P51532 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SMARCA4P51532 TOMM20P4-201ENST00000427861 435 ntBASIC5.06□□□□□ -1.6
SMARCA4P51532 AC009263.1-201ENST00000441193 1239 ntBASIC5.06□□□□□ -1.6
SMARCA4P51532 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.06□□□□□ -1.6
SMARCA4P51532 Y_RNA.673-201ENST00000516306 88 ntBASIC5.06□□□□□ -1.6
SMARCA4P51532 SNORA31.21-201ENST00000517180 77 ntBASIC5.06□□□□□ -1.6
SMARCA4P51532 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.06□□□□□ -1.6
SMARCA4P51532 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SMARCA4P51532 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SMARCA4P51532 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.06□□□□□ -1.6
SMARCA4P51532 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SMARCA4P51532 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SMARCA4P51532 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
SMARCA4P51532 MIR184-201ENST00000384962 84 ntBASIC5.05□□□□□ -1.6
SMARCA4P51532 AL356057.3-201ENST00000402607 340 ntBASIC5.05□□□□□ -1.6
SMARCA4P51532 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.05□□□□□ -1.6
SMARCA4P51532 AC126121.1-201ENST00000482313 553 ntBASIC5.05□□□□□ -1.6
SMARCA4P51532 AL122125.1-201ENST00000616999 600 ntBASIC5.05□□□□□ -1.6
SMARCA4P51532 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.05□□□□□ -1.6
SMARCA4P51532 AL049555.1-201ENST00000562834 1933 ntBASIC5.05□□□□□ -1.6
SMARCA4P51532 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SMARCA4P51532 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SMARCA4P51532 RNA5SP68-201ENST00000363885 119 ntBASIC5.05□□□□□ -1.6
SMARCA4P51532 AL603825.1-201ENST00000438481 80 ntBASIC5.05□□□□□ -1.6
SMARCA4P51532 snoU13.26-201ENST00000459452 105 ntBASIC5.05□□□□□ -1.6
SMARCA4P51532 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.05□□□□□ -1.6
SMARCA4P51532 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.05□□□□□ -1.6
SMARCA4P51532 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.05□□□□□ -1.6
SMARCA4P51532 AC099654.11-201ENST00000638857 294 ntBASIC5.05□□□□□ -1.6
SMARCA4P51532 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMARCA4P51532 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.04□□□□□ -1.6
SMARCA4P51532 RN7SKP58-201ENST00000411010 305 ntBASIC5.04□□□□□ -1.6
SMARCA4P51532 AC105402.1-201ENST00000413336 545 ntBASIC5.04□□□□□ -1.6
SMARCA4P51532 ANXA2P1-201ENST00000505539 926 ntBASIC5.04□□□□□ -1.6
SMARCA4P51532 RNA5SP282-201ENST00000516355 108 ntBASIC5.04□□□□□ -1.6
SMARCA4P51532 AC104027.1-201ENST00000521887 300 ntBASIC5.04□□□□□ -1.6
SMARCA4P51532 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SMARCA4P51532 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC5.04□□□□□ -1.6
SMARCA4P51532 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
SMARCA4P51532 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SMARCA4P51532 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SMARCA4P51532 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.03□□□□□ -1.6
SMARCA4P51532 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SMARCA4P51532 FABP5P12-201ENST00000515543 389 ntBASIC5.03□□□□□ -1.6
SMARCA4P51532 ATP5F1P7-201ENST00000567330 760 ntBASIC5.03□□□□□ -1.6
SMARCA4P51532 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.03□□□□□ -1.6
SMARCA4P51532 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
SMARCA4P51532 AL356490.1-201ENST00000623079 479 ntBASIC5.03□□□□□ -1.6
SMARCA4P51532 AC073869.7-201ENST00000640874 297 ntBASIC5.03□□□□□ -1.6
SMARCA4P51532 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SMARCA4P51532 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SMARCA4P51532 RNA5SP289-201ENST00000362332 137 ntBASIC5.02□□□□□ -1.61
SMARCA4P51532 RNU6-304P-201ENST00000364855 107 ntBASIC5.02□□□□□ -1.61
SMARCA4P51532 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
SMARCA4P51532 MIR764-201ENST00000390811 85 ntBASIC5.02□□□□□ -1.61
SMARCA4P51532 MTCO1P52-201ENST00000433928 531 ntBASIC5.02□□□□□ -1.61
SMARCA4P51532 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC5.02□□□□□ -1.61
SMARCA4P51532 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.02□□□□□ -1.61
SMARCA4P51532 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SMARCA4P51532 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SMARCA4P51532 MIR504-201ENST00000385065 83 ntBASIC5.01□□□□□ -1.61
SMARCA4P51532 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SMARCA4P51532 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.01□□□□□ -1.61
SMARCA4P51532 AC022882.1-201ENST00000532142 501 ntBASIC5.01□□□□□ -1.61
SMARCA4P51532 AL591516.1-201ENST00000611326 274 ntBASIC5.01□□□□□ -1.61
SMARCA4P51532 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SMARCA4P51532 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SMARCA4P51532 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SMARCA4P51532 RNA5SP508-201ENST00000411327 119 ntBASIC5.01□□□□□ -1.61
SMARCA4P51532 FAR1P1-201ENST00000427163 934 ntBASIC5.01□□□□□ -1.61
SMARCA4P51532 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.01□□□□□ -1.61
SMARCA4P51532 AC003982.1-202ENST00000469928 248 ntBASIC5.01□□□□□ -1.61
SMARCA4P51532 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC5.01□□□□□ -1.61
SMARCA4P51532 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.01□□□□□ -1.61
SMARCA4P51532 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.01□□□□□ -1.61
SMARCA4P51532 AC233280.2-201ENST00000603917 1070 ntBASIC5.01□□□□□ -1.61
SMARCA4P51532 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
SMARCA4P51532 MTND4P26-201ENST00000415971 1359 ntBASIC5.01□□□□□ -1.61
SMARCA4P51532 ELL2P4-201ENST00000446870 1376 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms