Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC009127.1-201ENST00000467090 155 ntBASIC5.47□□□□□ -1.53
MRE11P49959 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
MRE11P49959 AC104687.1-201ENST00000485829 412 ntBASIC5.47□□□□□ -1.53
MRE11P49959 AC138853.1-201ENST00000503549 823 ntBASIC5.47□□□□□ -1.53
MRE11P49959 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.47□□□□□ -1.53
MRE11P49959 RNA5SP446-201ENST00000515955 82 ntBASIC5.47□□□□□ -1.53
MRE11P49959 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.47□□□□□ -1.53
MRE11P49959 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
MRE11P49959 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.47□□□□□ -1.53
MRE11P49959 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.47□□□□□ -1.53
MRE11P49959 OR4G1P-201ENST00000588632 938 ntBASIC5.47□□□□□ -1.53
MRE11P49959 AL390838.2-201ENST00000602394 274 ntBASIC5.47□□□□□ -1.53
MRE11P49959 AC133552.5-201ENST00000604266 540 ntBASIC5.47□□□□□ -1.53
MRE11P49959 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.47□□□□□ -1.53
MRE11P49959 AL356266.1-201ENST00000623311 483 ntBASIC5.47□□□□□ -1.53
MRE11P49959 AL450326.2-201ENST00000421913 1962 ntBASIC5.47□□□□□ -1.53
MRE11P49959 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.47□□□□□ -1.53
MRE11P49959 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
MRE11P49959 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.47□□□□□ -1.53
MRE11P49959 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
MRE11P49959 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
MRE11P49959 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.46□□□□□ -1.53
MRE11P49959 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
MRE11P49959 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.46□□□□□ -1.54
MRE11P49959 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
MRE11P49959 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
MRE11P49959 AC105074.1-201ENST00000623380 3095 ntBASIC5.46□□□□□ -1.54
MRE11P49959 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
MRE11P49959 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.46□□□□□ -1.54
MRE11P49959 MIR16-1-201ENST00000385271 89 ntBASIC5.46□□□□□ -1.54
MRE11P49959 AL596276.1-201ENST00000434465 418 ntBASIC5.46□□□□□ -1.54
MRE11P49959 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.46□□□□□ -1.54
MRE11P49959 AC093392.2-201ENST00000450682 337 ntBASIC5.46□□□□□ -1.54
MRE11P49959 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.46□□□□□ -1.54
MRE11P49959 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.46□□□□□ -1.54
MRE11P49959 SSXP1-201ENST00000453640 473 ntBASIC5.46□□□□□ -1.54
MRE11P49959 FGF7P3-201ENST00000454645 303 ntBASIC5.46□□□□□ -1.54
MRE11P49959 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC5.46□□□□□ -1.54
MRE11P49959 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.46□□□□□ -1.54
MRE11P49959 AC111193.1-201ENST00000504097 155 ntBASIC5.46□□□□□ -1.54
MRE11P49959 AC116353.2-201ENST00000505332 712 ntBASIC5.46□□□□□ -1.54
MRE11P49959 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.46□□□□□ -1.54
MRE11P49959 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.46□□□□□ -1.54
MRE11P49959 RN7SKP31-201ENST00000516354 278 ntBASIC5.46□□□□□ -1.54
MRE11P49959 RNU6-709P-201ENST00000517257 104 ntBASIC5.46□□□□□ -1.54
MRE11P49959 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.46□□□□□ -1.54
MRE11P49959 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.46□□□□□ -1.54
MRE11P49959 AC074029.1-201ENST00000552531 1044 ntBASIC5.46□□□□□ -1.54
MRE11P49959 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.46□□□□□ -1.54
MRE11P49959 MIR548Y-201ENST00000582739 110 ntBASIC5.46□□□□□ -1.54
MRE11P49959 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.46□□□□□ -1.54
MRE11P49959 VN1R92P-201ENST00000598511 928 ntBASIC5.46□□□□□ -1.54
MRE11P49959 AC011451.2-201ENST00000604303 598 ntBASIC5.46□□□□□ -1.54
MRE11P49959 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.46□□□□□ -1.54
MRE11P49959 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
MRE11P49959 SEPT14P19-203ENST00000633205 211 ntBASIC5.46□□□□□ -1.54
MRE11P49959 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
MRE11P49959 THAP12P4-201ENST00000528321 2266 ntBASIC5.46□□□□□ -1.54
MRE11P49959 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
MRE11P49959 AC009229.4-201ENST00000623854 1947 ntBASIC5.46□□□□□ -1.54
MRE11P49959 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
MRE11P49959 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.45□□□□□ -1.54
MRE11P49959 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
MRE11P49959 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.45□□□□□ -1.54
MRE11P49959 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.45□□□□□ -1.54
MRE11P49959 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
MRE11P49959 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
MRE11P49959 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
MRE11P49959 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
MRE11P49959 SNURFL-201ENST00000309296 343 ntBASIC5.45□□□□□ -1.54
MRE11P49959 MIR670-201ENST00000390142 98 ntBASIC5.45□□□□□ -1.54
MRE11P49959 RPS3AP23-201ENST00000401762 784 ntBASIC5.45□□□□□ -1.54
MRE11P49959 CYCSP45-201ENST00000402289 315 ntBASIC5.45□□□□□ -1.54
MRE11P49959 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.45□□□□□ -1.54
MRE11P49959 MIR548F1-201ENST00000408667 84 ntBASIC5.45□□□□□ -1.54
MRE11P49959 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
MRE11P49959 RPS7P13-201ENST00000413955 498 ntBASIC5.45□□□□□ -1.54
MRE11P49959 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.45□□□□□ -1.54
MRE11P49959 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC5.45□□□□□ -1.54
MRE11P49959 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.45□□□□□ -1.54
MRE11P49959 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.45□□□□□ -1.54
MRE11P49959 RPL23AP35-201ENST00000451906 501 ntBASIC5.45□□□□□ -1.54
MRE11P49959 BX248409.1-201ENST00000455497 255 ntBASIC5.45□□□□□ -1.54
MRE11P49959 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.45□□□□□ -1.54
MRE11P49959 AC111000.3-201ENST00000508057 576 ntBASIC5.45□□□□□ -1.54
MRE11P49959 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.45□□□□□ -1.54
MRE11P49959 AC093281.2-201ENST00000510153 597 ntBASIC5.45□□□□□ -1.54
MRE11P49959 AC006499.6-201ENST00000511169 607 ntBASIC5.45□□□□□ -1.54
MRE11P49959 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
MRE11P49959 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.45□□□□□ -1.54
MRE11P49959 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.45□□□□□ -1.54
MRE11P49959 FKBP1BP1-201ENST00000553366 325 ntBASIC5.45□□□□□ -1.54
MRE11P49959 GTF2IP8-201ENST00000560687 584 ntBASIC5.45□□□□□ -1.54
MRE11P49959 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.45□□□□□ -1.54
MRE11P49959 AP005205.1-201ENST00000563503 508 ntBASIC5.45□□□□□ -1.54
MRE11P49959 AC007224.1-201ENST00000564410 144 ntBASIC5.45□□□□□ -1.54
MRE11P49959 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.45□□□□□ -1.54
MRE11P49959 SNORA74C-1-201ENST00000580726 201 ntBASIC5.45□□□□□ -1.54
MRE11P49959 HMGB2P1-201ENST00000591146 634 ntBASIC5.45□□□□□ -1.54
MRE11P49959 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms