Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 RN7SKP272-201ENST00000516988 232 ntBASIC3.17□□□□□ -1.9
CENPFP49454 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.17□□□□□ -1.9
CENPFP49454 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.17□□□□□ -1.9
CENPFP49454 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CENPFP49454 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.17□□□□□ -1.9
CENPFP49454 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
CENPFP49454 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.16□□□□□ -1.9
CENPFP49454 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.16□□□□□ -1.9
CENPFP49454 OR2X1P-201ENST00000421144 687 ntBASIC3.16□□□□□ -1.9
CENPFP49454 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CENPFP49454 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CENPFP49454 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CENPFP49454 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CENPFP49454 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CENPFP49454 AL592045.1-201ENST00000429867 352 ntBASIC3.16□□□□□ -1.9
CENPFP49454 AC010401.1-201ENST00000463867 348 ntBASIC3.16□□□□□ -1.9
CENPFP49454 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.16□□□□□ -1.9
CENPFP49454 TCP11X3P-202ENST00000514289 1254 ntBASIC3.16□□□□□ -1.9
CENPFP49454 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC3.16□□□□□ -1.9
CENPFP49454 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.16□□□□□ -1.9
CENPFP49454 AC007954.1-201ENST00000554198 494 ntBASIC3.16□□□□□ -1.9
CENPFP49454 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.16□□□□□ -1.9
CENPFP49454 MFSD8-233ENST00000641482 4860 ntBASIC3.16□□□□□ -1.9
CENPFP49454 AC006020.1-201ENST00000420179 1854 ntBASIC3.16□□□□□ -1.9
CENPFP49454 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CENPFP49454 MTCO1P51-201ENST00000427672 1060 ntBASIC3.15□□□□□ -1.9
CENPFP49454 UQCRHP3-201ENST00000451503 251 ntBASIC3.15□□□□□ -1.9
CENPFP49454 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.15□□□□□ -1.9
CENPFP49454 AC243972.3-201ENST00000539655 198 ntBASIC3.15□□□□□ -1.9
CENPFP49454 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CENPFP49454 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
CENPFP49454 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CENPFP49454 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
CENPFP49454 RPL7P25-201ENST00000404151 721 ntBASIC3.15□□□□□ -1.91
CENPFP49454 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.15□□□□□ -1.91
CENPFP49454 RN7SL499P-201ENST00000481141 276 ntBASIC3.15□□□□□ -1.91
CENPFP49454 OR5G4P-201ENST00000525251 760 ntBASIC3.15□□□□□ -1.91
CENPFP49454 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.15□□□□□ -1.91
CENPFP49454 AL442163.2-201ENST00000553912 710 ntBASIC3.15□□□□□ -1.91
CENPFP49454 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.15□□□□□ -1.91
CENPFP49454 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.15□□□□□ -1.91
CENPFP49454 RPS4XP5-202ENST00000449995 1334 ntBASIC3.15□□□□□ -1.91
CENPFP49454 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CENPFP49454 Y_RNA.355-201ENST00000365462 98 ntBASIC3.15□□□□□ -1.91
CENPFP49454 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.15□□□□□ -1.91
CENPFP49454 AP002770.2-201ENST00000543613 532 ntBASIC3.15□□□□□ -1.91
CENPFP49454 AC078814.3-201ENST00000553036 491 ntBASIC3.15□□□□□ -1.91
CENPFP49454 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.15□□□□□ -1.91
CENPFP49454 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.15□□□□□ -1.91
CENPFP49454 AC009039.2-201ENST00000624524 529 ntBASIC3.15□□□□□ -1.91
CENPFP49454 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CENPFP49454 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CENPFP49454 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.15□□□□□ -1.91
CENPFP49454 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CENPFP49454 MIR592-201ENST00000384959 97 ntBASIC3.14□□□□□ -1.91
CENPFP49454 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.14□□□□□ -1.91
CENPFP49454 RPL23AP15-201ENST00000450202 459 ntBASIC3.14□□□□□ -1.91
CENPFP49454 SYT14P1-201ENST00000481459 721 ntBASIC3.14□□□□□ -1.91
CENPFP49454 RNA5SP282-201ENST00000516355 108 ntBASIC3.14□□□□□ -1.91
CENPFP49454 AC027290.2-201ENST00000623210 18662 ntBASIC3.14□□□□□ -1.91
CENPFP49454 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CENPFP49454 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CENPFP49454 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.14□□□□□ -1.91
CENPFP49454 MIR448-201ENST00000362131 111 ntBASIC3.14□□□□□ -1.91
CENPFP49454 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CENPFP49454 AC104297.1-201ENST00000393779 870 ntBASIC3.14□□□□□ -1.91
CENPFP49454 VTA1P1-201ENST00000414044 866 ntBASIC3.14□□□□□ -1.91
CENPFP49454 TRIM60P18-201ENST00000441518 828 ntBASIC3.14□□□□□ -1.91
CENPFP49454 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CENPFP49454 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.14□□□□□ -1.91
CENPFP49454 DNAJC19P1-201ENST00000455312 319 ntBASIC3.14□□□□□ -1.91
CENPFP49454 RPL23AP71-201ENST00000470966 469 ntBASIC3.14□□□□□ -1.91
CENPFP49454 ACTG1P13-201ENST00000486987 1043 ntBASIC3.14□□□□□ -1.91
CENPFP49454 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.14□□□□□ -1.91
CENPFP49454 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.14□□□□□ -1.91
CENPFP49454 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.14□□□□□ -1.91
CENPFP49454 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CENPFP49454 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CENPFP49454 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.14□□□□□ -1.91
CENPFP49454 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CENPFP49454 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CENPFP49454 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC3.14□□□□□ -1.91
CENPFP49454 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CENPFP49454 MTCO1P52-201ENST00000433928 531 ntBASIC3.14□□□□□ -1.91
CENPFP49454 AP000867.2-201ENST00000532468 320 ntBASIC3.14□□□□□ -1.91
CENPFP49454 YWHAZP1-201ENST00000556286 722 ntBASIC3.14□□□□□ -1.91
CENPFP49454 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.14□□□□□ -1.91
CENPFP49454 AL596275.2-204ENST00000641628 552 ntBASIC3.14□□□□□ -1.91
CENPFP49454 AL596275.2-206ENST00000641957 626 ntBASIC3.14□□□□□ -1.91
CENPFP49454 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.13□□□□□ -1.91
CENPFP49454 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CENPFP49454 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CENPFP49454 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CENPFP49454 Y_RNA.269-201ENST00000364685 89 ntBASIC3.13□□□□□ -1.91
CENPFP49454 AP002088.1-201ENST00000382740 395 ntBASIC3.13□□□□□ -1.91
CENPFP49454 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CENPFP49454 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.13□□□□□ -1.91
CENPFP49454 AC005921.1-201ENST00000510589 286 ntBASIC3.13□□□□□ -1.91
CENPFP49454 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.13□□□□□ -1.91
CENPFP49454 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms