Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.29□□□□□ -1.72
HADHAP40939 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.29□□□□□ -1.72
HADHAP40939 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.29□□□□□ -1.72
HADHAP40939 RPL35P6-201ENST00000490024 372 ntBASIC4.29□□□□□ -1.72
HADHAP40939 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.29□□□□□ -1.72
HADHAP40939 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.29□□□□□ -1.72
HADHAP40939 AC020593.1-201ENST00000507399 299 ntBASIC4.29□□□□□ -1.72
HADHAP40939 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.29□□□□□ -1.72
HADHAP40939 MTCYBP37-201ENST00000510642 1133 ntBASIC4.29□□□□□ -1.72
HADHAP40939 RNA5SP73-201ENST00000516744 108 ntBASIC4.29□□□□□ -1.72
HADHAP40939 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.29□□□□□ -1.72
HADHAP40939 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.29□□□□□ -1.72
HADHAP40939 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HADHAP40939 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HADHAP40939 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.29□□□□□ -1.72
HADHAP40939 AC068831.4-201ENST00000556118 109 ntBASIC4.29□□□□□ -1.72
HADHAP40939 AC138915.2-201ENST00000569776 97 ntBASIC4.29□□□□□ -1.72
HADHAP40939 AC022662.1-201ENST00000580252 331 ntBASIC4.29□□□□□ -1.72
HADHAP40939 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.29□□□□□ -1.72
HADHAP40939 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.29□□□□□ -1.72
HADHAP40939 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.29□□□□□ -1.72
HADHAP40939 AL139395.1-201ENST00000603662 160 ntBASIC4.29□□□□□ -1.72
HADHAP40939 AL354984.3-201ENST00000604803 325 ntBASIC4.29□□□□□ -1.72
HADHAP40939 MIR6716-201ENST00000613413 80 ntBASIC4.29□□□□□ -1.72
HADHAP40939 MLECP1-201ENST00000615893 709 ntBASIC4.29□□□□□ -1.72
HADHAP40939 AC231759.1-201ENST00000616455 597 ntBASIC4.29□□□□□ -1.72
HADHAP40939 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.29□□□□□ -1.72
HADHAP40939 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.29□□□□□ -1.72
HADHAP40939 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HADHAP40939 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
HADHAP40939 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HADHAP40939 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
HADHAP40939 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.29□□□□□ -1.72
HADHAP40939 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.29□□□□□ -1.72
HADHAP40939 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HADHAP40939 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HADHAP40939 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
HADHAP40939 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
HADHAP40939 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HADHAP40939 ZNF37BP-203ENST00000452306 1352 ntBASIC4.28□□□□□ -1.72
HADHAP40939 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HADHAP40939 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HADHAP40939 RNU6-216P-201ENST00000363282 104 ntBASIC4.28□□□□□ -1.72
HADHAP40939 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HADHAP40939 SNORA51.6-201ENST00000384151 125 ntBASIC4.28□□□□□ -1.72
HADHAP40939 MIR3074-201ENST00000384885 81 ntBASIC4.28□□□□□ -1.72
HADHAP40939 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HADHAP40939 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
HADHAP40939 AL024474.1-201ENST00000404655 591 ntBASIC4.28□□□□□ -1.72
HADHAP40939 AL590084.1-201ENST00000407885 387 ntBASIC4.28□□□□□ -1.72
HADHAP40939 AC011933.1-201ENST00000413334 321 ntBASIC4.28□□□□□ -1.72
HADHAP40939 AL592310.1-201ENST00000414330 671 ntBASIC4.28□□□□□ -1.72
HADHAP40939 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.28□□□□□ -1.72
HADHAP40939 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.28□□□□□ -1.72
HADHAP40939 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.28□□□□□ -1.72
HADHAP40939 RSL24D1P6-201ENST00000426934 401 ntBASIC4.28□□□□□ -1.72
HADHAP40939 USP9YP11-201ENST00000427537 717 ntBASIC4.28□□□□□ -1.72
HADHAP40939 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
HADHAP40939 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.28□□□□□ -1.72
HADHAP40939 AC116533.1-201ENST00000459748 321 ntBASIC4.28□□□□□ -1.72
HADHAP40939 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HADHAP40939 AC005798.1-201ENST00000513715 387 ntBASIC4.28□□□□□ -1.72
HADHAP40939 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
HADHAP40939 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.28□□□□□ -1.72
HADHAP40939 AC090502.2-201ENST00000549267 280 ntBASIC4.28□□□□□ -1.72
HADHAP40939 AC125611.1-201ENST00000549563 229 ntBASIC4.28□□□□□ -1.72
HADHAP40939 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.28□□□□□ -1.72
HADHAP40939 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.28□□□□□ -1.72
HADHAP40939 AC005412.1-201ENST00000580812 1049 ntBASIC4.28□□□□□ -1.72
HADHAP40939 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.28□□□□□ -1.72
HADHAP40939 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HADHAP40939 AC008638.3-201ENST00000603341 463 ntBASIC4.28□□□□□ -1.72
HADHAP40939 AC113368.1-201ENST00000603736 382 ntBASIC4.28□□□□□ -1.72
HADHAP40939 AL590392.1-201ENST00000604960 446 ntBASIC4.28□□□□□ -1.72
HADHAP40939 AC009974.1-201ENST00000608881 455 ntBASIC4.28□□□□□ -1.72
HADHAP40939 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.28□□□□□ -1.72
HADHAP40939 AC005962.2-201ENST00000611427 652 ntBASIC4.28□□□□□ -1.72
HADHAP40939 FAM27D1-201ENST00000612308 341 ntBASIC4.28□□□□□ -1.72
HADHAP40939 uc_338.32-201ENST00000615087 172 ntBASIC4.28□□□□□ -1.72
HADHAP40939 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.28□□□□□ -1.72
HADHAP40939 MARK2P15-201ENST00000432204 2186 ntBASIC4.28□□□□□ -1.72
HADHAP40939 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.28□□□□□ -1.72
HADHAP40939 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HADHAP40939 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.28□□□□□ -1.72
HADHAP40939 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HADHAP40939 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HADHAP40939 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.28□□□□□ -1.72
HADHAP40939 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HADHAP40939 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HADHAP40939 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.27□□□□□ -1.73
HADHAP40939 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HADHAP40939 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.27□□□□□ -1.73
HADHAP40939 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HADHAP40939 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HADHAP40939 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HADHAP40939 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HADHAP40939 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.27□□□□□ -1.73
HADHAP40939 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HADHAP40939 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HADHAP40939 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms